Sphingobium xenophagum: CJD35_04195
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Entry
CJD35_04195 CDS
T05146
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
shyd
Sphingobium xenophagum
Pathway
shyd00730
Thiamine metabolism
shyd01100
Metabolic pathways
shyd01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
shyd00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
CJD35_04195
Enzymes [BR:
shyd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
CJD35_04195
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
ASY45638
UniProt:
A0A249MWD0
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All DBs
Position
I:complement(845355..847235)
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AA seq
626 aa
AA seq
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MNVTTGAIRGSKKIHVGPLNVAMREITLEPGSGEPPVRVYDTSGPYTDPNAQIDIMAGLP
QLRRDWIMARGDVEDYDPRAVKPEDNGLKGPDRSGGVAQFPGHHRRPLRARSGMNVSQMH
YARRGIITPEMEYVAERENLGRARLAEYIRDGQDWGAAIPDYVTPEFVRDEVARGRAIIP
SNINHPESEPMAIGRNFLVKINANIGNSAVASDVASEVDKLVWSIRWGADTVMDLSTGRN
IHDTREWIIRNSPVPIGTVPIYQALEKVGGVAEELTWDIFRDTLIEQAEQGVDYFTIHAG
VRLAYIPMTAKRVTGIVSRGGSIMAKWCLSHHKESFLYEHFDEITEICKAYDIAYSLGDG
LRPGSIADANDEAQFSELYTLGELTKRAWAQDVQVMIEGPGHVPMHKIKQNMDKQLEACG
EAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWYGTAMLCYVTPKEHLGLPDRDDVKVGVV
TYKLAAHAADLAKGHPAAKVRDDALSRARFEFRWRDQFNLSLDPDTAEQYHDQTLPAEGA
KSAHFCSMCGPKFCSMKITQEVRDFAARQNQDADTFIAANPPRHGEGGGGAPLDAATAEQ
GMAEMSRVFRETGSELYMGAGDRERD
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcaccactggcgctatccgtggatcgaagaaaatccatgtcggcccgctcaac
gtcgcgatgcgcgaaatcacgctggaaccgggcagcggcgagccgccggtgcgagtctat
gacacgtccggtccttacactgatcccaatgcgcagatcgacatcatggcgggcctgccc
caattgcgccgcgactggatcatggcgcgcggcgatgtggaggattatgatccgcgcgcg
gtaaagcccgaagataacggcctcaaaggcccggatcgctccggcggcgtcgcccaattc
cccggccaccaccgccgcccgctgcgcgcgcggtccggcatgaacgtcagccagatgcat
tatgcccgacgcggcatcatcacgccggaaatggaatatgtcgcggaacgcgaaaatctg
ggccgtgcgcgcctcgccgaatatattcgcgacgggcaggattggggcgcggccatcccc
gattatgtgacgcccgaattcgtccgtgacgaagtcgcgcgcggccgggcgatcatcccc
agcaacatcaaccaccccgaatccgaaccgatggcgatcggccgcaatttcctggtcaag
atcaacgccaatatcggcaactcagccgtcgccagcgacgtcgcctccgaagtcgacaag
ctggtctggtcgatccgctggggcgcggacacggtgatggacctgtccacgggccgcaac
atccatgacacgcgcgaatggatcatccgcaactcgcccgtgccgatcggcaccgtcccc
atctatcaggcgctcgaaaaggtcggcggcgtggccgaggaactgacctgggatatcttc
cgcgacacgctgatcgagcaggccgaacagggcgtcgattatttcaccatccatgcgggc
gtccgcctcgcctatatcccgatgacggcgaagcgcgtcaccggcatcgtctcgcgcggc
ggctcgatcatggcgaaatggtgcctcagccatcacaaggaaagcttcctctacgagcat
ttcgacgagatcaccgaaatctgcaaagcctatgacattgcctacagcctgggcgacggc
ctgcgccccggatcgatcgcggacgccaatgacgaagcgcagttttccgagctctacacg
ctgggcgaactcaccaaacgcgcctgggcgcaggatgtgcaggtgatgatcgaggggccg
ggccatgtccccatgcacaagatcaagcagaatatggacaagcaactcgaagcctgcggc
gaagcccccttctacacgctggggccgctcaccaccgacatcgcgccgggatacgaccat
atcaccagcggcatcggcgcggccatgatcggctggtacggcacggcgatgctctgctat
gtcacgcccaaggagcatctgggcctgcccgaccgcgacgatgtgaaggtcggcgtcgtc
acctacaagctggccgcccacgccgccgaccttgccaagggccatcccgccgccaaggtc
cgcgacgacgccctgagccgcgcccgcttcgaattccgctggcgcgaccagttcaacttg
agcctcgaccccgacaccgccgaacaatatcacgaccagacgctccccgccgaaggcgcg
aagtcagcccatttctgctcgatgtgcggccccaaattctgctcgatgaaaatcacgcaa
gaggtccgcgatttcgccgccaggcaaaatcaggacgccgacaccttcatcgccgccaat
cctccccggcacggggagggtggagggggcgcaccgctggacgccgccaccgccgaacag
ggtatggcggaaatgagccgggtgttcagggaaaccggcagcgagctatatatgggcgct
ggggacagggaacgggattga
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