Sphingobium xenophagum: CJD35_04635
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Entry
CJD35_04635 CDS
T05146
Name
(GenBank) histidine--tRNA ligase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
shyd
Sphingobium xenophagum
Pathway
shyd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
shyd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CJD35_04635
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
shyd01007
]
CJD35_04635
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shyd03016
]
CJD35_04635
Enzymes [BR:
shyd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
CJD35_04635
Amino acid related enzymes [BR:
shyd01007
]
Aminoacyl-tRNA synthetase
Class II (A)
CJD35_04635
Transfer RNA biogenesis [BR:
shyd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CJD35_04635
Prokaryotic type
CJD35_04635
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
tRNA-synt_2b
HGTP_anticodon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
ASY45645
UniProt:
A0A249MWS5
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Position
I:complement(945440..946765)
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AA seq
441 aa
AA seq
DB search
MAKIETPRPVRGTQDMLGGTAEAFAERFAHVVATFDRVRKLYGFQRVEVPVFESTAVFAR
SLGESTDVVSKEMYTFEDRGGDSITLRPEFTAGISRAYITEGWQQYAPLKVATHGPLFRY
ERPQKGRFRQFHQLDAEIIGAAEPGADVELLVFADQLLKELGIDDGVTLTLNTLGDAASR
EAWRAALIAHFEAHRGDLSEDSVDRLAKNPLRILDSKDPRDRPVADSAPDIDAYLTDEAR
SFFEKVTSGLDAAGVAWERNARLVRGLDYYRHTAFEFVTDRLGAQGTVMGGGRYDGLIEN
LGGPATPAVGWAAGIERLAMLVDAPEVEKPTVAIIPMGEAAEARATGIIADLRRAGIACD
MGFRGNMKKRMQRANASGALFAAILGDDEIAKGVMALKNLRSGEQQEVPLASPYDLLKML
VVGEGMARNPALLEGAKAMVD
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaatcgaaaccccgcgcccggttcgcggcacgcaagacatgttgggcggcaca
gcagaagcgtttgcggaacgctttgcgcatgtggtcgcaacctttgaccgggtgcgcaaa
ctttacggctttcagcgggtagaggtgccggtattcgaatccaccgccgtattcgcccgg
tcgctgggcgaatccaccgatgtcgtgtcgaaggaaatgtacacgttcgaggatcgcggc
ggcgattccatcacgctgcgcccggaatttaccgccgggatcagccgcgcctatattacc
gagggctggcagcaatatgcgccgctcaaggtggcgacgcatggcccgctgttccgctac
gaacggccgcaaaagggccgcttccgccagtttcaccagctcgacgctgaaatcatcggc
gcggccgagccgggcgcggacgtcgaattgctggtgttcgcggaccagttgctcaaggaa
ctgggcattgacgacggcgtgacgctgacgctcaacacgctgggcgacgcggccagccgc
gaagcctggcgcgccgcgctgatcgcgcatttcgaggcgcatcgcggggacttgtcggag
gatagcgtcgatcggctggcgaagaatccgctgcgcatcctcgacagcaaagacccgcgc
gaccgccccgtcgccgacagcgcgcccgacatcgacgcctatctgaccgacgaggcgcgt
agctttttcgagaaggtgacgagcggcctggatgcggcgggcgtcgcatgggaacgcaat
gcccggctggtccgcggcctcgattattatcgccacaccgcgttcgagttcgtcaccgac
cggctgggcgcgcaaggcacggtgatgggtggcggacgctatgacgggctgatcgagaat
ctgggcggcccggcgacgcctgcggtcggctgggcagcggggatcgagcggctggcgatg
ctggtggatgcgccggaggtggagaagccgaccgtcgccatcatcccgatgggcgaagcc
gccgaagcgagggccaccggcatcattgccgatctgcgtcgcgccggtatcgcctgcgac
atgggctttcgcggcaatatgaaaaagcggatgcagcgtgccaatgcttcaggcgcgctg
tttgctgctattttgggcgatgatgaaatcgccaaaggggtcatggcgctcaaaaatctg
cggtcgggtgaacagcaggaagtgccactggcttctccttatgacttgttgaagatgctg
gtggttggcgaaggcatggctcgaaatccagcgctgctggaaggcgcaaaggcaatggtc
gactga
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