Sphingobium xenophagum: CJD35_05265
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Entry
CJD35_05265 CDS
T05146
Name
(GenBank) conjugal transfer protein TraG
Organism
shyd
Sphingobium xenophagum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4SS-DNA_transf
TraG-D_C
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
ASY43925
UniProt:
A0A249MRW9
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All DBs
Position
I:1080775..1082793
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AA seq
672 aa
AA seq
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MSKLLIGQILVVFAIVIAGVWAATQWAAAMLAYQPELGTPWFRLAGVPIYHPWALFPWWY
HYDAYAPHVFDRAGTFAGASGFVGCAAAIFGSLWRARQSSNVTTYGSARWAKAREIERAG
LHRDAGVMLGTLGGRYLRHDGPEHVMAFAPTRSGKGVGLVVPTLLSWTGSAVVHDIKGEN
WTLTAGWRARFSHCLLFNPTDAASAHYNPLVEVRRGVDEVRDVQNIADILVDPEGALERR
NHWEKTSHSLLVGAILHILYAEEEKTLARVATFLSDPQRSFVATLRRMMTTNHLGDDKNP
KVHPVVASAARELLNKSENERSGVLSTAMSFLGLYRDPTVAEVTSRCDWRIADLIEAERP
LSLYLVIPPSDISRTKPLVRLVLNQIGRRLTERLGQPGTSARRHQLLMMLDEFPALGRLD
FFETSLAFMAGYGIRAFLIAQSLNQIEKAYGEHNAILDNCHVRVAFATNDERTAKRISDA
LGTATEQRAMRNYAGHRLAPWLAHVMVSRQETARQLLTPGEVMQLSPDDELVLVSGLAPI
RARKLRYFRDRNFIARVAPAPLLAQGRYADCPKQRGDDWSGRVRGIDARLHQTEDAAGGE
DDGGMQQQRHPGLAEQTSKSIDAAETRDPQTAPDDDDIAADKRAMDQAQGLSAVARGYAI
NEGAHRDLVPGL
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
gtgtccaaattactcatcggccagatccttgtcgtcttcgcgatcgtgatcgcgggggtc
tgggccgcgacgcaatgggcagcggcgatgctggcctatcaacccgagctgggaacgccg
tggttccggctcgctggcgtgccgatctatcatccctgggcgctgttcccctggtggtat
cattacgatgcctatgccccgcatgttttcgaccgggcgggcacgttcgcaggcgccagc
ggcttcgtcggttgcgcggcggcgatcttcggctcgctgtggcgcgcgcgccagtcgagc
aacgtcaccacctatggttccgcccgctgggcgaaggcccgtgagatcgagcgcgccggc
ctgcatcgcgacgccggcgtcatgctcggcacgcttggcggccgctatctgcgccatgac
ggccccgaacacgtcatggcgttcgcgccgacccgctcgggcaagggcgtaggcctcgtc
gttccgaccttactctcctggaccggatcggccgtcgtccacgacatcaagggcgagaac
tggacgctgacagccggatggcgcgcgcgcttctctcactgcctgctgttcaatccgacc
gacgcagcgtccgcgcactacaatccgctggtcgaggttcggcgcggcgtggacgaggtg
cgcgacgtccagaacatcgccgacattctggtcgatccggaaggtgcgctcgaacgccgc
aaccattgggaaaagaccagccattcgctgttggtcggggcgatcctccacatcctctat
gccgaggaggagaagacgctcgcgcgggtcgcgaccttcctctccgatccccagcgcagc
ttcgtcgccacgctccgccgaatgatgaccaccaatcacctcggcgacgacaagaatccc
aaggtccatcccgtcgtcgcctccgctgcgcgcgaactgctcaacaagagcgaaaacgag
cggtcaggcgtgctgtcgacggcgatgtcgttcctcggcctctatcgcgatccgaccgtc
gccgaagtcacctcgcgctgcgactggcggatcgccgacctcatcgaggccgagcgccca
ttgtcgctctatcttgtcattccgccatcggacatcagccgcaccaagccgctcgtccgt
ctcgtgctcaaccagatcggccgccgcctgaccgagcggctcggccagcccggcacgtcc
gcgcggcggcatcagctcctgatgatgctggacgaatttccggcactcggccgcctcgac
ttcttcgagaccagcctcgccttcatggccggctacggcatccgcgctttcctgatcgcg
cagagcctcaaccagatcgagaaggcctatggcgagcacaacgccattctcgacaattgc
catgtccgcgtcgccttcgcgaccaatgatgagcgcaccgccaagcgcatctccgatgcg
ctcggcaccgcgaccgagcagcgtgcgatgcgcaactacgccgggcaccggctcgcgccc
tggctcgcgcatgtcatggtcagccgtcaggaaaccgcccgccaactcctgacgcccggc
gaggtgatgcagctctcgcccgatgacgaactcgtgctcgtctccggactcgcgccgatc
cgggcgcgcaagttgcgctacttccgcgatcgcaacttcatcgcgcgcgtggcaccggca
ccattgctggcacagggccgctatgccgattgccccaaacaacgcggcgatgactggtcc
ggccgggtgcgcggtatcgatgcccggctgcaccagaccgaggatgccgcgggcggcgag
gacgacggcggcatgcagcagcagcgccaccctggccttgccgagcagacttccaagtcg
atcgacgctgccgaaacgcgcgatccccagacggcgccggacgacgatgatattgccgcc
gacaagcgcgccatggaccaggcgcagggcctgagcgcagtcgcccgcggctatgcgatc
aacgagggcgctcaccgcgacctcgtgcccgggctgtga
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