Sphingobium xenophagum: CJD35_05855
Help
Entry
CJD35_05855 CDS
T05146
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
shyd
Sphingobium xenophagum
Brite
KEGG Orthology (KO) [BR:
shyd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shyd03016
]
CJD35_05855
Transfer RNA biogenesis [BR:
shyd03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
CJD35_05855
Prokaryotic type
Methyltransferases
CJD35_05855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
ABC_tran
DUF4349
AAA_28
AAA_29
TAF
AAA_18
AAA_24
Motif
Other DBs
NCBI-ProteinID:
ASY44029
UniProt:
A0A249MSA4
LinkDB
All DBs
Position
I:1207460..1208743
Genome browser
AA seq
427 aa
AA seq
DB search
MTDTIFALSSGAPPAGIAVIRVSGPAARAALERLARRVPPPRTASLALLVDPQDDAPLDR
ALTLWLPGPATVTGEDLVELHCHGGRAVVAAVEATLAAMPGLRRAEAGEFTRRAFANGRM
DLNAVEGLADLLAAETQQQRRAALMMAEGHFSRRIEGWRATLLDLSAMAEAALDFSDEDD
VPDAAIEARIGAGITALAQDVAAMLAAPSAERLRDGVRVVLAGPPNAGKSTLLNALVGRD
AAIVSDIAGTTRDRIEVPAAIGGVAFLFTDTAGLRDETGDAIEAIGIDRARSALAAADII
LWLGDEAEAPRDDAILIAAQCDRDGAAERPGLRLSARTGEGMDALVAMLLERAAHMLPGE
GDYALHARQRQRVGQIAAFLDSAAGAHDLLILAEELRQARREIDALTGQAGTEDMLDRLF
AGFCIGK
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacacgattttcgccctgtcgagcggcgcgccgcccgcggggattgcggtgatc
cgcgtcagtggtcccgccgcccgcgccgcgctggaacgattggcccgccgcgtcccgcca
ccgcgcaccgccagtcttgcgctgctggtcgacccgcaggacgatgcgccgctcgaccgg
gccttgaccctgtggctccccggtccggcaaccgtcaccggcgaagatctggtcgagttg
cactgccatggcggccgcgcggtcgtggcggcagtagaggcaacgctcgcggcgatgccg
gggctgcgccgcgccgaagcgggcgagtttacccgtcgcgccttcgccaatggccggatg
gacctgaacgcggtggaagggctggcggacctgctggccgccgaaacccagcaacagcgc
cgcgccgcgctgatgatggcggaagggcatttctcccgacggatagagggctggcgcgcg
accctgctcgacctgtcggcgatggccgaagccgcgctcgatttctccgatgaggatgat
gtgcccgacgccgcgatcgaggcgcggatcggcgcgggcatcacggcgctggcgcaggat
gtcgccgccatgctcgccgcgccgtctgccgagcggttgcgggacggcgtgcgagtggtg
ctggccgggccgcccaatgcgggcaagtcgacccttctcaatgcgctggtcggacgggat
gcagcgatcgtatccgacatcgccgggacgacgcgtgaccggatcgaggtgcctgcggcg
atcggcggcgtcgccttcctgttcaccgacacggcgggactgcgggacgagacaggcgac
gcgatcgaggcgatcggcatcgaccgggcgcgatcggcgctggcggcggcggacatcatc
ctgtggctgggcgatgaggcagaggcaccgcgcgacgatgcgatattgatcgcggcgcag
tgcgaccgcgacggcgcggcagagcgtccgggcctgcgcctgtccgcgcgcacgggggaa
gggatggacgcattggtggcgatgctgctggagcgcgccgcgcacatgctgccgggcgaa
ggcgactatgcactgcacgcgcgacagcgccagcgcgttggacagattgcggcatttctc
gattccgctgctggcgcgcatgacctgttgatcttggccgaggagttgcgacaggcgcgg
cgagagatcgacgcgctgaccggccaagccggaaccgaggatatgctagaccggctgttt
gcgggcttctgtatcggcaaatga
DBGET
integrated database retrieval system
