KEGG   Sphingobium xenophagum: CJD35_07655
Entry
CJD35_07655       CDS       T05146                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
shyd  Sphingobium xenophagum
Pathway
shyd00300  Lysine biosynthesis
shyd00470  D-Amino acid metabolism
shyd01100  Metabolic pathways
shyd01110  Biosynthesis of secondary metabolites
shyd01120  Microbial metabolism in diverse environments
shyd01230  Biosynthesis of amino acids
Module
shyd_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:shyd00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    CJD35_07655 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    CJD35_07655 (lysA)
Enzymes [BR:shyd01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     CJD35_07655 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: ASY44334
UniProt: A0A249MT15
LinkDB
Position
I:1574559..1575824
AA seq 421 aa
MDHFDYVDGAMQVEQVPMAAIADAVGTPVYVYSTATLTRHVGVFRDALGSLHNPLIAFAV
KANPNAAVLATLAKLGLGADVVSGGELLRAIAAGIPADRIVFSGVGKTAEEMRLALDHGI
FQFNLESEPEAEMLSQVALSMGKRAPVAYRINPDVDAGTHAKISTGKSENKFGIPYARAL
ESYAAARDLPGLDVQGVAVHIGSQLTDLAPLEAAFTKVGALIAALRDAGHDIRTADLGGG
LGVPYDPAQPEPPSPAAYGDMVCRVTQDWPVRLMFEPGRVIVGNAGALLSRVVRVKQGAK
APFVIVDAAMNDLLRPSLYDAWHDIRAVTPAGQRAAANVVGPVCETGDTFAMGRDMDVVA
AGDLVAFMTAGAYGATMAGTYNSRPLTPEVLVSGDKWAVVRARPPIEALIAGDSIPDWLA
D
NT seq 1266 nt   +upstreamnt  +downstreamnt
ttggaccatttcgactatgtggacggcgccatgcaggtggagcaggtgccgatggcggcg
atcgccgatgcggtcggcacgccggtctatgtctattcgaccgcgaccctgacgcgccat
gtcggcgtgttccgcgacgcactgggcagccttcacaatccgctgatcgcctttgcggtc
aaggcgaaccccaatgcggcggtgctggcgacgctggcgaaactgggcctgggcgcggac
gtggtgtcgggcggggaattgctgcgcgcgatcgcggcgggcattccggcagaccgcatc
gtcttttcgggcgtgggcaagacggctgaggaaatgcggctggcgctggaccatggcatt
ttccagttcaatctggaaagcgaaccggaagcggaaatgctgtcgcaagtcgcgctgtcg
atgggcaagcgcgcgccggtggcctatcggatcaacccggatgtggatgcgggtacccac
gccaagatttcgaccggcaagtcggaaaacaagttcggcatcccctatgccagggcgctg
gaaagctatgccgccgcgcgcgatctgccggggctggatgtgcagggcgttgccgtccat
atcggcagccagctgaccgacctcgccccgctggaggcggcctttaccaaggttggcgcg
ctgatcgcggcgctgcgcgatgcgggccatgacattcgcaccgccgatctgggtggcggc
ctgggcgttccctatgaccccgcccagccggagccgcccagcccggcggcctatggcgac
atggtgtgccgggtaacgcaggactggccggtgcggctgatgttcgaaccgggccgggtg
atcgtgggcaatgcaggagccttgctatcgcgggttgtgcgggtgaagcagggcgcgaag
gcgcctttcgtcatcgtcgacgcggcgatgaacgacctgttgcggcccagcctgtatgac
gcctggcatgatattcgcgcggtgaccccggcggggcagcgcgccgccgccaatgtggtg
gggccggtgtgcgagacgggcgatactttcgccatgggccgcgacatggacgtggtggcc
gcgggcgatctggtcgcgttcatgacggcgggcgcttatggcgcgacgatggcgggcacc
tataacagccgcccgctgacccctgaagtgctggtatcgggcgacaaatgggcggtggtg
cgtgcgcgcccgccgatcgaggcgctgatcgctggcgatagcattccggactggctggcc
gactga

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