Sphingobium xenophagum: CJD35_07725
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Entry
CJD35_07725 CDS
T05146
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
shyd
Sphingobium xenophagum
Pathway
shyd00630
Glyoxylate and dicarboxylate metabolism
shyd00680
Methane metabolism
shyd01100
Metabolic pathways
shyd01120
Microbial metabolism in diverse environments
shyd01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
shyd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CJD35_07725
09102 Energy metabolism
00680 Methane metabolism
CJD35_07725
Enzymes [BR:
shyd01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
CJD35_07725
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
Molybdop_Fe4S4
NADH-G_4Fe-4S_3
Fer4_7
Fer4
Fer4_9
Fer4_10
Fer4_6
Fer4_21
Fer4_8
Fer4_16
Motif
Other DBs
NCBI-ProteinID:
ASY44346
UniProt:
A0A249MSK4
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All DBs
Position
I:1588521..1591367
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AA seq
948 aa
AA seq
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MTFTRETDHGTPAAIATGKSVTLTIDGQAITLPEGTSIMRAASLLGGSIPKLCATDSVES
FGSCRLCLVEVEGRNGYPASCTTPVAEGMVVRTQTDRLKQLRRGVMELYISDHPLDCLTC
GANGDCELQDQAGAVGLRDVRYGYDGATNMGQAKDQSNPYFDFDPSKCIVCSRCVRACDE
VQGTFALTIEGMGFDSKVSASQGEGFLGSECVSCGACVQACPTASLIEKKVVEVGTPDRA
VVTTCAYCGVGCTFRAEMRGEELVRMVPWKDGKANRGHSCVKGRFAWGYAQHQDRILNPM
IRASIDEPWREVSWDEAIAHTASEFRRIQAKYGTRSIGGITSSRCTNEETFLVQKLIRQG
FGNNNVDTCARVCHSPTGYGLSQTFGTSAGTQDFDSVMQSDVILVIGANPTDGHPVFASR
MKRRLRQGAKLIVMDPRRTDLVKSPHIEADHHLPLRPGTNVAMLTAMAHVIVTEKLYDEA
FIRERCDWDEFADWADFVSQPARSPEAIEPLTGVKADEVRAAARLYATGGNGAIYYGLGV
TEHSQGSSTVMAIANLAMATGNVGREGVGVNPLRGQNNVQGACDMGSFPHEFSGYRHVSD
TATRQLFERTWGVSLDAEPGLRIPNMLDAATDGTFKGLFVQGEDILQSDPNTHHVAAGLA
AMECVVVQDLFLNETANYAHVFLPGSTFLEKDGTFTNAERRIQRVRKVMAPLNGYADWEI
VQLVANAMGLQWTYDHPAQIMDEIAALTPTFAGVHYDRLEAEGSLQWPANDAAPDGTPTM
HIDGFVRGKGKFVVTDYVPTDEKTGPRFPLLLTTGRILSHYNVGAQTRRTANTAWHPEDR
LEIHPSDAENRGIKEGDWVALKSRAGETTLRAQVTERVAPGVVYTTFHHPETQANVITTD
YSDWATNCPEYKVTAVQVMPSNGPSDWQLDYADQARMSRRIAPLEAAE
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgacctttacccgcgaaaccgaccatggcacgcccgctgcgattgcgaccggcaagtcc
gtcacgctgaccatcgacgggcaggcgataaccctgcccgaaggcaccagcatcatgcgc
gcggcgtcgctgctgggtggctccattcccaaactctgcgccactgacagcgtcgaaagc
ttcggttcgtgccgcctgtgcctggtggaggtggagggccgcaacggctatcccgcgtcc
tgcacgacgccagtggccgaaggcatggtggtgcgcacccagaccgaccgcctcaagcag
ttgcggcgcggggtgatggaactgtatatctccgaccatccgctcgattgcctgacctgc
ggcgcgaacggggactgcgaattgcaggatcaggctggcgcggttggcctgcgcgacgtg
cgctatggctatgatggcgcgaccaatatggggcaggcgaaggaccagtctaacccctat
ttcgatttcgatcccagcaagtgcatcgtctgttcgcgctgcgtgcgcgcctgtgacgaa
gtgcaggggacgttcgcgttgacgatcgaggggatggggttcgattccaaggtttccgcg
tcgcagggcgagggatttctggggtccgaatgcgtgtcctgtggcgcctgcgtgcaggcc
tgtcccaccgcatcgctgatcgaaaagaaggtcgtcgaagtcggcacccccgaccgcgcc
gtcgtcaccacctgcgcctattgcggtgtgggctgcaccttccgtgcggaaatgcggggc
gaggaactggtgcgcatggtgccgtggaaggacggcaaggccaatcgcggccatagctgc
gtcaagggtcgcttcgcctggggctatgcccagcatcaggatcgcatcctgaacccgatg
atccgcgccagcatcgacgagccatggcgcgaagtgtcgtgggacgaggcgatcgcccat
acggccagtgaattccgtcgcatccaggcgaaatatggcacccgctccatcggcggcatc
acgtcgagccgctgcaccaatgaggaaaccttccttgtccagaagctgatccgccagggt
tttggcaataataatgtcgatacctgcgcccgcgtctgccactcgccgaccggctatggg
ctgagccagaccttcgggacgtcggcgggtacgcaggatttcgacagcgtgatgcagtcg
gacgtcatcctggtcatcggcgcgaacccgaccgacggccatcccgtattcgccagccgg
atgaaacgccgcttgcggcagggggccaagctgatcgtcatggacccgcgccgcaccgat
ctggtcaaatccccccatatcgaggcggaccatcatctgcccctgcgccccggcaccaat
gtcgcgatgctgaccgcgatggcgcatgtcatcgtcacggagaagctctatgacgaagcc
ttcatccgcgaacggtgcgactgggatgagtttgccgactgggccgatttcgtctcccaa
cccgcccgttcgcccgaagcgatcgaaccgctgaccggcgtgaaggcggacgaggtgcgg
gccgccgcccggctctatgccacaggcggcaatggcgcgatctattatggcctgggcgtt
accgaacatagccaggggtcatcgaccgtgatggccatcgccaacctggctatggcgacc
ggcaatgtcgggcgcgaaggcgtgggcgtgaacccgctgcgggggcagaataatgtgcag
ggcgcctgcgacatgggcagcttcccgcatgaattttccggctatcgccatgtgtccgac
acggcgacgcggcaattgttcgaacgcacatggggcgtcagcctggacgccgagccgggg
ctgcgcatccccaacatgctggacgccgcgaccgacgggacgttcaaggggctgttcgtg
cagggcgaggatattcttcagtccgatcccaacacccatcatgtcgcggcggggcttgca
gcgatggagtgcgtcgtggtgcaggacctgttcctcaacgaaaccgccaattacgcccat
gtctttctgccgggatcgaccttcctggaaaaggacggcaccttcaccaacgccgaacgg
cgcatccagcgggtgcgcaaggtgatggccccgctcaatggctatgccgactgggaaatc
gtgcaactggtggccaacgccatgggcctgcagtggacctatgatcaccccgcgcagatc
atggatgagatcgccgcgctcaccccgacctttgcgggcgtccattatgaccggctggag
gcggaaggatcgctgcaatggcccgccaatgacgctgcgcccgacggtacgccgaccatg
catatcgacggtttcgtgcgggggaagggcaagttcgtcgtcaccgactatgtgccgacg
gacgaaaagaccggcccgcgcttcccgctgctgctgacgacggggcgcatcctgtcccac
tataatgtcggcgcgcagacgcgacggacggcgaacaccgcctggcacccggaggaccgg
ctggaaatccatccgtccgatgcggaaaatcgcgggatcaaggaaggcgactgggttgcc
ctgaaaagccgggcgggggaaaccacgctgcgtgcgcaagtgaccgagcgggtagcgccg
ggcgtggtctatacgaccttccaccaccccgaaacccaggccaatgtcatcaccaccgac
tatagcgactgggcgaccaactgcccggaatataaggtgacggcggtgcaggtgatgcca
tccaacggccccagcgactggcaactcgactatgccgatcaggccaggatgagccgccgc
attgcgccactggaagcggcggaatag
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