Sphingobium xenophagum: CJD35_08930
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Entry
CJD35_08930 CDS
T05146
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
shyd
Sphingobium xenophagum
Pathway
shyd00300
Lysine biosynthesis
shyd01100
Metabolic pathways
shyd01120
Microbial metabolism in diverse environments
shyd01230
Biosynthesis of amino acids
Module
shyd_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
shyd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CJD35_08930
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
shyd01002
]
CJD35_08930
Enzymes [BR:
shyd01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
CJD35_08930
Peptidases and inhibitors [BR:
shyd01002
]
Metallo peptidases
Family M20
CJD35_08930
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
ASY44555
UniProt:
A0A249MTP0
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All DBs
Position
I:complement(1823732..1824886)
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AA seq
384 aa
AA seq
DB search
MTMTRANDDVVALARQLLACPSVTPATGAVFAALEDMLLPLGFTVDRFVVGEAPDGPVEN
LLAWRTTGAGPHFAFAGHLDVVPPGPGWTSDPFAPEIRGDLLYGRGAVDMKGSIAAFVAA
LGTLSDDLPGTISLIITGDEEGPAVYGTLALMERMAARELRPDLCVVGEPTSSARLGDVV
KIGRRGSVNMWISVAGTQGHVAYPHLADNPVPRLVRILAAIDALVLDEGTDWFQPSNIEI
TDMEVGNPTTNVIPGAANARISIRFNDQHSGASLVERISAIAAAEGGTVMAKISGEPFLT
APGTLSNLVSGAIRQVTAVEAELSTTGGTSDARFLSRLCPVVEFGLNNATMHKLDEAVAV
QDLHDLVEIYRLIVERALGQPVGA
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgaccagagccaatgatgacgtggtggcgcttgcccggcagctgcttgcctgt
ccatccgtaacgccagcgaccggggcggtgttcgccgcgcttgaggacatgctgctgcct
ttgggctttaccgtggatcggttcgtggtcggcgaagcgcccgacgggccggtcgaaaat
ctgctggcatggcgcactaccggcgcagggccgcacttcgcctttgccggacatctggac
gtggtgccacccggtcccggctggaccagcgatccgttcgcgccggagattcgcggcgac
ctgctctacggacgcggcgcggtggacatgaagggatcgatcgctgccttcgtcgccgcg
ctgggcaccctgtccgacgacctgcccggtacgatcagcctgatcatcaccggggatgag
gaaggcccggccgtctatggcacgctggcgctgatggagcggatggccgcgcgcgaactg
cgcccggacctgtgtgtcgtgggtgaaccgacatcgtcggcccggctgggcgatgtggtc
aagatcgggcggcgcgggtcggtgaatatgtggatcagcgtggccggaacccagggccat
gtcgcgtatccgcacctggccgacaatcccgtgccccgtctggtccgcatcctggccgcg
atcgatgcgctggtgctggacgaagggaccgactggttccagcccagcaatatagagatt
accgacatggaggttggcaacccgaccaccaatgtcattcccggcgcggcgaacgcgcgc
atctctatacgcttcaacgatcagcatagcggtgcttcgctcgtcgaacggatcagtgcg
atcgcggcggccgagggcggcacggtgatggccaagatcagcggcgaaccctttctgacc
gcaccgggcacattgtccaatctggtgtcgggcgcgatccggcaagtaaccgccgtggag
gcggaactgtccaccacggggggcacgtcagacgcgcgcttcctctcgcgcctgtgcccg
gtggtggagtttggcctgaacaatgcgaccatgcacaagctggacgaggccgtcgcggtg
caggatctgcacgatctggtcgagatttaccggctgatcgtggagcgggcgctgggtcag
ccagtcggcgcttaa
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