KEGG   Sphingobium xenophagum: CJD35_09220
Entry
CJD35_09220       CDS       T05146                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
shyd  Sphingobium xenophagum
Pathway
shyd02024  Quorum sensing
shyd03060  Protein export
shyd03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:shyd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    CJD35_09220
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    CJD35_09220
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CJD35_09220
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:shyd02044]
    CJD35_09220
Enzymes [BR:shyd01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     CJD35_09220
Secretion system [BR:shyd02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   CJD35_09220
  Eukaryotic Sec-SRP protein
   CJD35_09220
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA Zeta_toxin AAA_33 AAA_22 AAA_31 ArsA_ATPase AAA_14 AAA_16 ABC_tran Thymidylate_kin AAA_17 YqeC TctA APS_kinase ResIII cobW
Other DBs
NCBI-ProteinID: ASY44607
UniProt: A0A249MTX4
LinkDB
Position
I:1877469..1878944
AA seq 491 aa
MMFDSLSDRLGGVFDKLRGRGALTEDDVRAAMREVRIALLEADVALPVVRQFVDQATERA
VGSDVLRSVTPGQMVVKIVSDTLTETLGSDTSDLMIDVAPPAVIMMVGLQGSGKTTSTAK
IAKRLKDKDRKKVLMASLDVQRPAAQEQLAVLGTQCDVATLPIVAGQQPVDIARRALQSA
KLQGFDVVMLDTAGRLHVDQALMDEMKAVADVATPAEILLVVDSLTGQDAVNVAQSFTAQ
VPLTGVVLTRMDGDARGGAALSMRAVTGRPIKFAGTGEKLDAIEIFHPQRVAQRILGMGD
VVSLVERAAESIDADEADKLAKKMAKGQFDMNDLRAQLSQMRRMGGLGALAGMIPGLKKA
QAAMANSGANDKTLIHLDAMIGSMTPKERERPALINAKRKIRIAKGSGTTVQEVNRLLKM
HQEMEGAMKKIRKMGGLKGLAKMFTGGGMGGLGGPDGGQGGPPDLSGLGGLGGLGGNMPK
LPPGFQNFMKK
NT seq 1476 nt   +upstreamnt  +downstreamnt
atgatgttcgattcgctgagcgatcgtctgggtggggtattcgacaagctgcgggggcgt
ggtgcgctcacggaggacgatgtccgcgccgcgatgcgcgaggtgcgaatcgcgctgctg
gaagccgacgtcgcgcttcctgtcgtgcgccagttcgtcgatcaggcgaccgagcgggca
gtgggcagcgacgtgctgcggtcggtcacgccggggcagatggtcgtcaagatcgtgtcc
gacacgctcaccgaaacgctggggtccgacacgtcggacctgatgatcgacgtggccccg
cccgccgtcatcatgatggtcggtttgcaggggtcgggcaagacgacctccacggccaag
atcgccaagcggctgaaggacaaggaccgcaagaaggtgctgatggcgtcgctcgacgtc
cagcgcccggccgcgcaggaacagctggcggtgctgggcacccagtgcgatgtggcgacc
ctgccgatcgtcgccgggcagcagccggtcgacatcgcccgccgcgcgctccagtcggcc
aagcttcagggcttcgacgtggtgatgctcgacaccgctggtcgcctgcatgtcgatcag
gcgctgatggacgagatgaaggcggtggccgatgtggcgacgcctgccgaaatcctgctg
gtggtcgactcgctgaccgggcaggacgcggtcaatgtggcgcagagctttaccgcgcag
gtgccgctgaccggcgtggtgctgacccggatggatggcgacgcgcgcggtggtgcggcg
ctgtcgatgcgcgcggtcaccggccgcccgatcaaatttgccggtactggcgaaaagctc
gacgcgatcgagatattccacccgcagcgcgtggcgcagcgcatattgggcatgggcgac
gtcgtcagcctggtcgagcgtgccgccgagagcatcgatgcggacgaagccgacaagctg
gccaagaaaatggccaagggtcagttcgacatgaacgacctgcgcgcgcagctcagtcag
atgcgccgcatgggcgggttgggcgcgctggcggggatgatccctggccttaagaaagcg
caggcggcgatggccaatagtggcgcgaacgacaagacgctgatccatctcgacgcgatg
atcggatcgatgacgcccaaggagcgggaacgcccggcgctcatcaacgccaagcgcaag
atccgcatcgccaaaggctccggcaccacggtgcaggaagtcaaccggctcctgaaaatg
catcaggaaatggaaggcgcgatgaagaagatccgcaagatgggcggccttaaagggctg
gccaagatgttcaccggcggtggcatgggcggattgggcggtcccgacggcggacagggc
ggcccgcccgatctgtccgggctgggcggccttggcggattgggcggcaacatgcccaag
ctgccgcccggctttcagaatttcatgaagaagtag

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