Sphingobium xenophagum: CJD35_09300
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Entry
CJD35_09300 CDS
T05146
Name
(GenBank) RNase adapter RapZ
KO
K06958
RNase adapter protein RapZ
Organism
shyd
Sphingobium xenophagum
Brite
KEGG Orthology (KO) [BR:
shyd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shyd03019
]
CJD35_09300
Messenger RNA biogenesis [BR:
shyd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CJD35_09300
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_22
AAA_33
Rad17
AAA_28
AAA_30
Zeta_toxin
AAA_18
ABC_tran
YfeC-like
AAA_16
T2SSE
Motif
Other DBs
NCBI-ProteinID:
ASY44621
UniProt:
A0A249MTC9
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Position
I:complement(1890408..1891346)
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AA seq
312 aa
AA seq
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MTQSHPKSILLLSGLSGAGKTTALKTLEDMGWEVVDNLPLVLLDRLLDTPLPAGHAGADD
RPLALGIDARTRGFDANAIVQRIKALRDNHGHDVETLFLDCSGTELERRFAETRRRHPLA
LDRPAADGIARERELTEPLRRWASQVIDTTSFSSNALQQAIRDRFSRERLSDPVLTILSF
GFSRGMPRNADLMFDMRFLRNPHWDDALRDKTGQDADVAAYIMADPAYEEAVGKIEELLK
IVLPRYAEAGKAYITVAFGCTGGRHRSVHVAERVARYLQDAGFSPTVSHRNMESAPQDSL
EKRPPGGPKAIS
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgacccagtctcaccccaaatccatcctcctcctgtccggcctgtcgggcgcgggcaag
accacggcgctcaaaacgctggaggatatgggctgggaagtggtggacaatctgccgctg
gtgctgctcgaccggctgctcgacacccccctacccgcgggccatgcgggcgcggacgac
cggccgctggcgctcggcatcgacgcgcgcacgcgcgggttcgatgccaatgccatcgtc
cagcggatcaaggcgctgcgcgacaatcatggccatgatgtcgaaaccctgttcctcgac
tgctccggcaccgaactggagcgccgctttgccgaaacccggcggcgccatccgctggcg
ctcgatcgcccggcggctgacgggatcgcgcgcgaacgcgaactgaccgagccgctgcgt
cgctgggccagccaggtgatcgacaccaccagcttctccagcaacgccctgcaacaggcg
atccgcgaccgtttctcgcgtgagcggctgtcggacccggtgctgaccatcttgtccttc
ggcttttcgcgcgggatgccgcgcaacgccgacctgatgttcgacatgcgtttcctgcgc
aacccgcattgggacgacgcgctgcgggacaagacggggcaggacgcggacgtcgccgcc
tatatcatggcggaccccgcctatgaggaagcggtcggcaagatcgaggaactgctcaaa
atagtgttgccgcgctacgcagaggccgggaaagcctatattaccgtggcgtttggctgc
accgggggacggcatcggtcggtccatgtggccgaacgcgtcgccagatacttgcaagac
gcgggcttttcgcccacggtctcgcaccgcaatatggaatcggcgccacaggatagtctg
gagaagcgcccaccgggaggcccgaaagcaatatcatga
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