Sphingobium xenophagum: CJD35_10435
Help
Entry
CJD35_10435 CDS
T05146
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
shyd
Sphingobium xenophagum
Pathway
shyd00470
D-Amino acid metabolism
shyd00550
Peptidoglycan biosynthesis
shyd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shyd00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CJD35_10435 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CJD35_10435 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
shyd01011
]
CJD35_10435 (murD)
Enzymes [BR:
shyd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
CJD35_10435 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
shyd01011
]
Precursor biosynthesis
Amino acid ligase
CJD35_10435 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
2-Hacid_dh_C
Motif
Other DBs
NCBI-ProteinID:
ASY44820
UniProt:
A0A249MTZ5
LinkDB
All DBs
Position
I:2111001..2112395
Genome browser
AA seq
464 aa
AA seq
DB search
MIVSDAFAGKTYAVLGLARSGLATVNCLSASGARVVAWDGREEARAAVAGKAELGDPMEI
DLSGFDGIVVSPGVPLNRHPITMRAKLAGVPIIGDIELFALARPTLPPHKVVGITGTNGK
STTTALIHHIIEQAGYPTVMGGNIGLPILGQPPLEPNLKGPGVYVLELSSYQIDLTHSLD
CDVAVLLNITPDHLDRYDGFEGYVASKARLFAMQSADHVAVIATEDEPSRAIAQNLRHSR
ESGNPSPDIMGQGEVGEMDPRLRGDDVKEVGSSDIDPVAQLTWPALQGPHNAQNAAVAIA
VAKALGIDEATIANALVSYASLPHRMQAVGTRNGVLYVNDSKATNAASTAPALAAWPPVD
GRPRIHWILGGVAKSDNLDECVPHFGNVAHAYTIGEAGHMFADLLRGSMAVDDSEMLSAA
VRRAARIAQPGDVVLLSPACASFDQFRDFEARGDAFVAAVGALE
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtttcggacgcctttgcgggcaagacctatgcggtgctggggctggcgcggtct
ggccttgccaccgtcaattgcctgtcggccagcggcgcgcgggtcgtggcgtgggacggg
cgcgaggaagcgcgcgctgcggtcgcgggcaaggcggaactgggcgatccgatggagatc
gaccttagcggctttgacggcatcgtcgtgtcgccgggcgtgccgctcaatcgccatccc
attaccatgcgcgcgaagctggctggcgtgccgatcatcggtgacatcgaactgttcgcg
ctggcccgcccgaccctaccgccgcacaaggtggtcggcatcactggcaccaacggcaag
tcgaccaccacggcgctgatccaccatatcatcgagcaggccggttatccgacggtgatg
ggtggcaatatcggcctgccgatcctgggccagccgccgctggagccgaacctgaagggg
ccgggcgtctatgtgctggaactgtcgagttaccagatcgacctgacgcatagcctggac
tgcgatgtggcggtgctgctcaatatcacgcccgatcaccttgatcgctatgacgggttt
gagggctatgtggcgagcaaggcgcggctgtttgcgatgcagtcggcggatcatgtcgcg
gtgatcgcgacggaggatgaaccgagccgggcgattgctcaaaacctccgtcattcccgc
gaaagcgggaacccatctcccgatattatgggccaaggcgaggttggagaaatggatccc
cgcctgcgcggggatgacgtgaaagaggttgggtcgagcgacattgatcccgtcgcccaa
ctgacgtggcccgccctgcaaggcccgcataatgcgcaaaacgccgctgtcgcaattgct
gtggccaaagcgctgggcattgatgaggcgaccatcgccaatgcgctcgtcagctacgcc
agcctcccccaccggatgcaggcggtcggcacgcgcaacggcgttctctacgtcaatgac
agcaaggcgaccaatgcggcttcgactgcgcccgcgctcgccgcatggccgccggttgat
ggacggccgcgcatccactggattttgggcggggtagccaagtcggataatctggacgag
tgcgtgccgcatttcggcaatgtcgcccatgcctataccatcggtgaggcggggcatatg
ttcgctgacctgctgcgcggctctatggcggtggacgatagcgagatgctaagcgccgcg
gtgcgccgcgccgcgcggatcgcgcagcccggcgacgtggtgctgctgtcgcccgcctgc
gccagtttcgaccagtttcgcgatttcgaggcgcgcggcgatgcttttgtcgcggcggtc
ggggcgctggaatag
DBGET
integrated database retrieval system
