KEGG   Sphingobium xenophagum: CJD35_10610
Entry
CJD35_10610       CDS       T05146                                 
Name
(GenBank) DNA repair protein RadA
  KO
K04485  DNA repair protein RadA/Sms
Organism
shyd  Sphingobium xenophagum
Brite
KEGG Orthology (KO) [BR:shyd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:shyd03400]
    CJD35_10610
DNA repair and recombination proteins [BR:shyd03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     CJD35_10610
SSDB
Motif
Pfam: ATPase AAA_25 Zn_ribbon_LapB ChlI AAA_16 Lon_C DnaB_C AAA AAA_22 RecA nSTAND3 DUF7125 AAA_30 NACHT NTPase_1 AAA_5 PAXNEB Glyco_hydro2_C5 Rad51 AAA_29 SLFN-g3_helicase DAP3 ATP-synt_ab AAA_14 DUF815 CobU MCM ATPase_2
Other DBs
NCBI-ProteinID: ASY45752
UniProt: A0A249MWT4
LinkDB
Position
I:2149489..2150856
AA seq 455 aa
MAKAKRKFVCQQCGTVSPRWQGQCEDCGEWNSIVEEAPETAFSARHDLHAGGRAITLIGL
DSKVELPPRTSTGIAEFDRALGGGIVAGSATLIGGDPGIGKSTLLLQAAARVAARGLSVV
YISGEEATDQVRLRAQRLGLGGAPVMLASATSVRDILTTLGEGEPPALLIIDSIQTMHSD
LIEGAPGTVSQVRASSQELIRFAKQRNSALVLVGHVTKDGSIAGPRVLEHMVDTVLAFEG
ERSHQYRILRAIKNRFGGTDEIGVFAMVAEGLEEVANPSALFLTHRDESVTGATVFPALE
GTRPVLVEIQALVVRLSSGATPRRAVVGWDSGRLAMVLAVLESRCGLSFSTCEVYLNVAG
GYRLSDPAADLAVAAALVSALSEKPVPADVVLFGEIALSSEIRPVAHAPLRLRESAKLGF
NRAFIPAAAADGVKGIAVNGFRTLAGLVDQMLGRG
NT seq 1368 nt   +upstreamnt  +downstreamnt
atggccaaggcaaagcggaaattcgtctgtcagcaatgcggcacagtctcgccgcggtgg
cagggccagtgcgaggattgcggcgagtggaacagcatcgtcgaggaagcgccggaaacc
gcgttttcggcgcggcacgacctgcacgctggcggacgggcgatcacgctgatcgggctg
gacagcaaggtcgagctgccgccgcgcaccagcaccggcattgccgagttcgatcgggcg
ttgggcggcggaatcgtggcgggatcggccacgctgatcggcggcgatccgggcatcggc
aaatcgaccttgttgttgcaggccgcggcgcgggtggcggcgcgcgggctgtcggtcgtc
tatatcagtggcgaggaagcgaccgatcaggtgcggctgcgcgcgcagcggctgggcctg
gggggcgcgccggtgatgctggcgagcgccacgtcggtgcgcgacatattgacgacgctg
ggggagggggagccgcccgccttgctcatcatcgattcgatccagacgatgcatagcgat
ctgatcgagggtgcgcccggcacggtcagccaggtgcgggcatcgtctcaggaactgatc
cgctttgccaagcagcgcaacagtgcgctcgtgctggtcggccatgtgaccaaggatggc
agcatcgccgggccgcgcgtgctggaacatatggtcgataccgtgctggcgttcgagggg
gagcgcagccaccagtaccgcatcctgcgcgcgatcaagaaccgctttggcggcacggac
gagatcggcgtgttcgcaatggtggcggaggggctggaggaagtcgccaacccgtccgcc
ttgttcctgacccatcgtgatgagagcgtgaccggcgcgaccgtgttcccggcgctggaa
ggaacccggccggtgctggtagagatacaggcgctggtcgtgcgcctgtcgagcggggcg
acgccacgccgggccgtagtaggctgggacagcggtcggctggcgatggtgctggcggtg
ctggaatcgcgctgtggcctcagcttttcgacctgcgaagtctatctgaacgtcgcgggc
ggctatcgcctgtcggacccggcggcggacctggcggtggcagcggcgctggtctccgcc
ctgtcggaaaagcccgttcccgccgacgtcgtgctgttcggcgaaatcgcgctgtcgagt
gaaatccggcccgtcgcccatgcgccgctgcggctgcgcgaatcggccaagctcgggttc
aatcgcgctttcatccccgccgcggcggcggacggggtgaagggaattgcggtcaatggc
ttccgcacgctcgcggggctggttgaccagatgctgggcaggggatag

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