Sphingobium xenophagum: CJD35_11220
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Entry
CJD35_11220 CDS
T05146
Symbol
rfbG
Name
(GenBank) CDP-glucose 4,6-dehydratase
KO
K01709
CDP-glucose 4,6-dehydratase [EC:
4.2.1.45
]
Organism
shyd
Sphingobium xenophagum
Pathway
shyd00541
Biosynthesis of various nucleotide sugars
shyd01100
Metabolic pathways
shyd01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
shyd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CJD35_11220 (rfbG)
Enzymes [BR:
shyd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.45 CDP-glucose 4,6-dehydratase
CJD35_11220 (rfbG)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
ASY45767
UniProt:
A0A249MX81
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All DBs
Position
I:2270342..2271415
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AA seq
357 aa
AA seq
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MGVSKNFWSGRSVFLTGHTGFMGGWLAAYLIHCGAHVHGYALAPNTEPAFFDATGLPSRL
ASSVLADIGDLDQLCRVLDQAAPSVVFHLAAQPLVRYAHAHPIETVRSNVMGTANLLEAV
RRNPGVKAVAVVTTDKVYRNLERAEPYTEDDELGGRELYSASKAASEFIVDAWQHSYLNE
QGKGVATIRAGNIFGGGDWAADRLVPDAIRTFSTGQPLVLRNPASTRPWQHVLDPLRGYL
VLAEGLVNQPKQYSGKWNFGPDVQDCRPVGDLAHLLAASWSDDARVETQASDSVFEERLL
ALDSSKAADRLGWIPHWPLETGVEKAVQWYRAYAAGADMWDVTIRQIEAMEQGGASA
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
ctgggcgtgagcaagaatttctggagcgggcgatcagttttcctgaccggacataccggc
ttcatgggcggctggctggctgcctatctgatccattgtggcgcccacgtgcacggctat
gcgctcgcgcccaataccgaaccggccttcttcgatgcgaccggtcttccgagcaggctt
gcctcgtccgttctggctgacatcggcgaccttgatcagctttgccgtgtgctcgaccaa
gccgctccttcggtcgtgttccatttggcggcgcaaccgctggtgcgctatgctcatgcc
cacccgatcgagactgtcaggtccaacgtcatggggacagccaatttgctcgaggcggtt
cgtcgcaaccctggggtgaaggccgttgccgtagtcactaccgacaaggtatatcgtaat
cttgagcgcgccgaaccctatacagaggacgacgaacttggcgggcgcgaactgtatagc
gccagcaaggccgccagtgaattcatcgttgatgcctggcagcactcttatctgaacgaa
cagggcaagggcgtcgccactatccgcgccggcaacattttcgggggcggtgattgggcg
gcggacaggctggtgccagatgccatccgcactttctcgaccggccagccgctggttctg
cgcaatccggcttcgacccgaccgtggcagcacgtccttgacccgctgcgcggctatctt
gttcttgcggaaggactggtgaaccaaccaaagcaatattccggcaagtggaatttcggt
cccgacgtgcaggactgtcgcccagtcggcgatcttgcccacctgctcgccgctagttgg
tcggacgacgcgcgcgtcgagacgcaagccagtgacagcgtttttgaagaacggttgctc
gcgctggactcgtcaaaggccgccgaccggctgggctggatcccgcattggccgctggaa
accggagttgaaaaagccgtgcaatggtatcgagcctatgccgctggagcggacatgtgg
gacgtgacgatccgccagatcgaagccatggaacaggggggcgcgagcgcatga
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