Sphingobium xenophagum: CJD35_11610
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Entry
CJD35_11610 CDS
T05146
Name
(GenBank) ADP-forming succinate--CoA ligase subunit beta
KO
K01903
succinyl-CoA synthetase beta subunit [EC:
6.2.1.5
]
Organism
shyd
Sphingobium xenophagum
Pathway
shyd00020
Citrate cycle (TCA cycle)
shyd00640
Propanoate metabolism
shyd00660
C5-Branched dibasic acid metabolism
shyd00720
Other carbon fixation pathways
shyd01100
Metabolic pathways
shyd01110
Biosynthesis of secondary metabolites
shyd01120
Microbial metabolism in diverse environments
shyd01200
Carbon metabolism
Module
shyd_M00009
Citrate cycle (TCA cycle, Krebs cycle)
shyd_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
shyd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
CJD35_11610
00640 Propanoate metabolism
CJD35_11610
00660 C5-Branched dibasic acid metabolism
CJD35_11610
09102 Energy metabolism
00720 Other carbon fixation pathways
CJD35_11610
Enzymes [BR:
shyd01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
CJD35_11610
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Gene cluster
GFIT
Motif
Pfam:
ATP-grasp_2
Ligase_CoA
Citrate_synth_N
ATP-grasp_5
Phage_tube_2
Motif
Other DBs
NCBI-ProteinID:
ASY45015
UniProt:
A0A249MUZ5
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All DBs
Position
I:2343844..2345043
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AA seq
399 aa
AA seq
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MNIHEYQAKELLAKYGAPIAAGYAAFSVEEAVEAAKKLPGPLYVVKSQIHAGGRGKGKFK
ELPAEAKGGVRLAFNLDEVKAHSADMLGNTLVTIQTGDAGKQVNRLYITDGADIDKEFYL
ALLVDRASSRIAFVVSTEGGMDIEEVAHSTPEKIHSFSVDPATGFMPHHGRSVAAALGLT
GDLAKQASKVAGSLYAAFLDTDAEQIEVNPLALTKQGNLLVLDAKVGFDGNAMFRHKDIA
ELRDLTEEDAAEVEASEYDLAYIKLDGNIGCMVNGAGLAMATMDIIKLNGEFPANFLDVG
GGASKEKVTAAFKIILKDPAVKGILVNIFGGIMKCDIIADGIVAAAKEVDLSVPLVVRLE
GTNVQQGKDILAASGLAIVPADDLGDAARKIVAEVRKAA
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgaatattcatgaatatcaggcgaaggaactgctcgcgaaatatggcgcgccgatcgcc
gccggttatgccgctttctcggtcgaggaagctgtcgaggccgccaagaagctgcccgga
ccgctttatgtcgtaaagtcgcagatccatgccggtggccgcggcaagggcaagttcaag
gaactgcccgccgaagccaagggcggcgttcgcctcgccttcaatctggatgaggtcaag
gcgcactcggccgacatgctgggcaacacgctggtgacgatccagaccggcgacgcgggc
aagcaggtcaaccgcctctacatcaccgacggcgccgacatcgacaaggaattctacctt
gccctgctggtcgatcgcgccagcagcaggatcgcgttcgtcgtatcgaccgaaggcggc
atggatattgaggaagtcgcccattcgacccctgaaaaaatccacagcttctccgtcgat
ccggcgaccggcttcatgccgcatcatggccgttcggtggctgccgcgctgggcctgacc
ggtgatctggccaagcaggcgtccaaggttgcaggctcgctctatgccgccttcctggac
accgatgccgagcagatcgaagtcaatccgctggcgctgaccaagcagggcaacctgctg
gtgctcgatgccaaggtcggtttcgatggtaacgccatgttccgtcacaaggacatcgcc
gaattgcgcgacctgaccgaggaagatgcggccgaagtcgaagcatccgaatatgacctc
gcctatatcaagctggacggcaatatcggctgcatggtcaacggcgctggcctggcgatg
gcgacgatggacatcatcaagctgaacggcgaattccccgccaacttcctggacgtcggc
ggtggcgcttcgaaggaaaaggtaaccgcagcgttcaagatcattctgaaggacccggcg
gtcaagggtatcctggtcaacattttcggcggcatcatgaagtgcgacatcatcgccgat
ggtatcgtggctgcagccaaggaagttgacctgtcggtcccactggtggttcgcctggaa
ggcaccaatgtgcagcagggcaaggacattctcgcggcttcgggcctggccatcgtcccg
gcggacgatctgggcgacgcagcacgcaagatcgtcgcagaagtgaggaaggcagcctga
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