Sphingobium xenophagum: CJD35_12225
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Entry
CJD35_12225 CDS
T05146
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
shyd
Sphingobium xenophagum
Pathway
shyd03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
shyd00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
CJD35_12225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
shyd03011
]
CJD35_12225
Ribosome [BR:
shyd03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
CJD35_12225
Bacteria
CJD35_12225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
SH3_16
CsrA
MazE_antitoxin
Motif
Other DBs
NCBI-ProteinID:
ASY45786
UniProt:
A0A249MWR6
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Position
I:complement(2511492..2513204)
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AA seq
570 aa
AA seq
DB search
MASTAFPTRDDFAALLNDSLGGEDGGFEGRVVKGTVTAIENDLAVIDVGLKSEGRVPLRE
FAMPGQKADIKVGDEVEVYVDRVENAHGEAMLSRDRARREAAWDKLEAEFTESARVEGVI
FGRVKGGFTVDLDGAVAFLPGSQVDIRPVRDVTPLMDIPQPFQILKMDRRRGNIVVSRRA
ILEETRAEQRSGLIQTLAEGQIIEGVVKNITDYGAFVDLGGIDGLLHVTDLSYKRINHPN
EMINIGDTVRVQIIRINRDTQRISLGMKQLESDPWEGASAKYPIGAKLSGRVTNITEYGA
FVELEPGIEGLVHVSEMSWTKKNVHPGKIVSTSQEVEVLVLEVDPEKRRISLGLKQAQSN
PWDSFAERHPIGSTVEGEVKNATEFGLFIGLDGDVDGMVHMSDIAWGISGEDALALHRKG
EAVQAVVLDIDVEKERISLGMKQLERGGPAAGGTTAAAAGLNKNAIVTVTVLEVRDGGLE
VQAGEDGATGFIKRSDLGRDRDEQRSERFQIGQKFDAMITGFDRAKKPTFSIKAMQIAEE
KQAVAQYGSSDSGASLGDILGEALKAKTEG
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggcctctacggcattccccacacgcgacgattttgccgcgcttctcaatgattccctc
ggtggcgaggacggcggctttgaaggccgcgtcgtcaagggcaccgttaccgccatcgaa
aacgacctggccgtcatcgacgtaggtctgaagtccgaaggccgcgtgccgctgcgcgaa
ttcgcgatgccgggccagaaggccgacatcaaggtcggcgacgaagtcgaagtctatgtc
gatcgcgtcgaaaacgcccatggcgaagcgatgctgtcgcgtgaccgcgcccgccgcgaa
gccgcctgggacaagctggaagccgagttcaccgagagcgcgcgcgtcgaaggcgtcatc
ttcggtcgcgtcaagggcggcttcaccgtcgatctggacggcgccgtggccttcctgccc
ggcagccaggtcgacatccgcccggttcgcgacgtcaccccgctgatggacattccgcag
cccttccagatcctgaagatggatcgccgccgcggcaacatcgtcgtgtcgcgtcgcgcc
attctggaagaaacccgcgccgaacagcgcagcggcctcatccagacgctggccgaaggc
cagatcatcgaaggcgtcgtcaagaacatcaccgactatggtgcgttcgttgacctgggc
ggcatcgatggcctgctgcacgtcaccgacctgtcgtacaagcgcatcaaccaccccaat
gagatgatcaacattggcgacaccgttcgcgtccagatcatccgcatcaaccgcgacacg
cagcgcatctcgcttggcatgaagcagttggaaagcgatccttgggaaggcgcatcggcc
aaatatccgatcggcgccaagctgtcgggccgcgtcacgaacatcaccgaatatggtgcg
ttcgtcgagctggagccgggcatcgaaggtctggtccacgtttcggaaatgtcctggacc
aagaagaacgtccaccccggcaagatcgtttcgaccagccaagaagtcgaagttctggtt
ctggaagtcgatcccgaaaagcgtcgcatctcgctgggcctcaagcaggcgcagtcgaac
ccgtgggacagctttgccgagcgtcacccgatcggttcgaccgtcgagggcgaagtcaag
aatgcgaccgagttcggcctgttcatcggcctggacggcgacgtcgacggcatggtccac
atgtccgacatcgcctggggcatctctggcgaggacgcgctggcgctgcatcgcaagggc
gaagccgtgcaggcggtcgttctggacatcgacgtcgagaaggagcgcatcagccttggc
atgaagcagcttgagcgtggcggtccggctgcgggcggcaccactgccgctgccgctggc
ctgaacaagaacgcgatcgtcaccgtgaccgtccttgaagtccgcgacggcggcctggaa
gtccaggccggcgaagatggcgccaccggcttcatcaagcgcagcgacctgggccgtgac
cgtgacgaacagcgttcggaacgcttccagatcggccagaagttcgacgccatgatcacc
ggtttcgaccgtgcgaagaagccgaccttctcgatcaaggcgatgcagatcgccgaagag
aagcaggctgtggcgcaatatggttcgtccgacagcggcgcgtcgctgggcgacattctg
ggcgaagcgctgaaggccaagaccgaaggctaa
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