Sphingobium xenophagum: CJD35_12360
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Entry
CJD35_12360 CDS
T05146
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
shyd
Sphingobium xenophagum
Brite
KEGG Orthology (KO) [BR:
shyd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shyd03032
]
CJD35_12360
03400 DNA repair and recombination proteins [BR:
shyd03400
]
CJD35_12360
Enzymes [BR:
shyd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CJD35_12360
DNA replication proteins [BR:
shyd03032
]
Prokaryotic type
DNA Topoisomerases
CJD35_12360
DNA repair and recombination proteins [BR:
shyd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CJD35_12360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DUF2835
Motif
Other DBs
NCBI-ProteinID:
ASY45143
UniProt:
A0A249MUU7
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Position
I:complement(2533673..2536336)
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AA seq
887 aa
AA seq
DB search
MNDETSLADPSDISPVSIVDEMKASYLDYAMSVIVSRALPDVRDGLKPVHRRILFSAQES
GFVYNRPYRKSARLVGEVMGKYHPHGDSSIYDALARMTQDWSMRVPLIDGQGNFGSMDPD
PPAAMRYTEARLAKVANALLEDLDKDTVDFTPNYDASESEPQVLPARFPNLLVNGAGGIA
VGMATNIPPHNLGEVLRACLAYIDNPGITIDELIAIVPGPDFPTAPLILGQSGARSAYHT
GRGSIMMRSRHVVEEGRGDRQSIVLTAIPYQVGKNGLVEKIAEAAKEKRIEGISDIRDES
SREGVRIVMDLKRDATPEVVLNQLWRNTPAQSSFPANMLAIRGGRPELLNLRDIIEAFVK
FREEVITRRTKFELNKARDRAHILLGLVVAVSNLDEMVKIIRGSSSPAEAREKLLAREWP
IGEIAPYIRLVEAIDVEVAGDFYKLSDLQVRAILDLRLHRLTALGRDEIGKELAELADAI
AEYLAILGDRVKLYAVMREEFEEIEREFATPRLSEITAAADGIEDEDLIEREDMVVTVTV
QGYIKRTPLESFRAQARGGKGRSGMATKDEDAITELFVTSTHTPVLFFSTAGKVYRMKVW
RLPEGGPATRGRPMVNLLPLGPGETIRTVLPLPEDEDSWKDLHVMFATANGTVRRNSMDA
FANVPSNGKLAMRFDEGSEDRLIGVALLTENDDVLLATRQGKAIRFAATDVREFQSRTST
GVRGMTLKSDDEVISLSILHRSGANQEQREEYLRYAPWKPEKDGEMADQAMFALMKEREQ
FILTVCANGYGKLSSAYDYRRTGRGGQGITNIDNIGRNGPVVGSFPVTHGDHLMLVTDQA
KLIRMGLDSLRVIGRNSAGVRLFDVAKDEHVVSAARIEENDEDEAEA
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgacgagaccagcctcgccgacccttcggacatcagccccgtcagcatcgtagac
gagatgaaggcgagctatctcgactatgccatgtcggtcatcgtgtcccgcgccctgccg
gatgtgcgcgacgggttgaagccggtgcatcgccgcattctcttctccgcccaggaatcg
ggcttcgtctataatcgtccctaccgcaaatcggcgcgtctcgtcggcgaagtcatgggt
aaatatcacccccatggcgacagttcgatctatgacgcattggcccgcatgacgcaggac
tggtcgatgcgcgtgccgctgatcgatggtcagggcaatttcggttcgatggaccccgac
ccgccagccgctatgcgctataccgaagcgcgcctggccaaggtcgccaacgccctgctg
gaggatctcgacaaggatacggtcgatttcacccccaactatgacgcatcggaaagcgaa
ccgcaggttctgcccgcccgcttccccaacctgctggtcaacggcgcgggcggcatcgcg
gtgggcatggcgaccaacatcccgccccataatctgggcgaagtgttgcgcgcgtgcctt
gcctatatcgacaatcccggcatcacgatcgacgaactgatcgcgatcgtccccggtccc
gatttcccgaccgcgccgctgatcctgggccagtccggcgcacgcagcgcctatcacacc
ggccgcggctccatcatgatgcggtcgcgtcatgtggtcgaggaagggcgcggcgatcgc
cagtcgatcgttctgaccgccattccctatcaggtcggcaaaaacggtctggtcgaaaag
attgccgaagccgccaaggaaaagcggatcgaggggatcagcgacattcgcgacgaatcc
agccgcgaaggcgtgcggatcgtcatggacctgaagcgcgatgcgacccccgaagtcgtt
ctgaaccaattgtggcgcaacacccccgcccaatcgagcttcccggccaatatgctggcc
attcgcggcggccgccccgaactgctgaacctgcgcgacatcatcgaagccttcgtcaag
ttccgcgaagaggtgatcacccgccgcaccaagttcgagctgaacaaggctcgcgaccgg
gcgcatatcttgctgggtctggttgttgcggtcagcaatctggacgagatggtgaagatc
atccgtggatcgtccagtcccgccgaagcgcgcgagaagctgctggcccgcgaatggccg
atcggcgagatcgcgccctatatccggctggtcgaggcgatcgacgtcgaagtggccggg
gatttctacaagctgtccgaccttcaggtccgcgccatcctcgacctgcgcctgcatcgg
ctgacggcgctgggccgcgacgaaatcggcaaggaactggccgaactggccgacgcgatc
gccgaatatctggcgatcctgggcgaccgggtcaaactctatgccgtcatgagggaagag
tttgaagagattgaacgggaattcgctacgccccgtttgtccgaaatcaccgccgctgcc
gacgggatcgaggatgaggatctgattgagcgagaggatatggtcgtcaccgtcacggtg
cagggctatatcaagcgcacgccgctggagagcttccgcgcacaggcgcgtggtggcaag
ggccggtcgggcatggcgaccaaggatgaggacgccatcaccgaattgttcgtgacgtcg
acccatacgccggtgctgttcttctctaccgccggcaaagtctatcgcatgaaagtatgg
cgcctgcccgaaggcggcccggcgacgcgcgggcggccgatggtcaacctgctgccgctt
ggtcccggcgaaaccatccgcaccgtgctgccgctgcccgaagatgaggatagctggaaa
gacctgcacgtcatgttcgccaccgcgaacggcactgtccggcgtaacagcatggacgct
tttgccaatgtgccgagcaatggcaagctggcgatgcgcttcgacgaaggcagcgaagac
cggctgatcggcgtcgcgctcctgaccgagaatgatgacgtgctgctcgccacgcgccag
ggcaaggcgatccgctttgccgcaactgatgtgcgcgagtttcagagccgcacgtcgacc
ggcgtgcgcggcatgacgctcaagagtgacgatgaagtcatctccttgtccatcctgcat
cgatcaggcgccaatcaggaacagcgcgaggaatatctccgctacgccccgtggaagcct
gaaaaggacggcgaaatggccgatcaggcgatgtttgcgctgatgaaggagcgcgagcag
ttcatcctgaccgtctgcgccaatggatatggaaaactctcctccgcctatgattatcga
cgcaccgggcgtggtggacagggcatcaccaatatcgacaatatcggtcgcaatggaccg
gtcgtcggcagcttcccggtcacgcatggagatcatctgatgctggtgaccgatcaggcc
aagctgatccgcatgggcctcgacagcctgcgcgtcatcggccgcaattccgcgggcgtc
cgcctgttcgacgtggccaaggatgagcatgtcgtcagcgccgcgcgcatcgaagagaat
gatgaggacgaagccgaggcatga
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