Sphingobium xenophagum: CJD35_12430
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Entry
CJD35_12430 CDS
T05146
Symbol
hemN
Name
(GenBank) radical SAM protein
KO
K02495
oxygen-independent coproporphyrinogen III oxidase [EC:
1.3.98.3
]
Organism
shyd
Sphingobium xenophagum
Pathway
shyd00860
Porphyrin metabolism
shyd01100
Metabolic pathways
shyd01110
Biosynthesis of secondary metabolites
shyd01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
shyd00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
CJD35_12430 (hemN)
Enzymes [BR:
shyd01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.98 With other, known, physiological acceptors
1.3.98.3 coproporphyrinogen dehydrogenase
CJD35_12430 (hemN)
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GFIT
Motif
Pfam:
Radical_SAM
Motif
Other DBs
NCBI-ProteinID:
ASY45156
UniProt:
A0A249MUX6
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Position
I:complement(2550265..2551572)
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AA seq
435 aa
AA seq
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MFRYHPDLLAAPVPRYTSYPTAAQFTDAVGAEALEERLDRLPQDAGISLYLHIPYCHDIC
WYCGCNTGAATRPRRLATYVDALEQEIALVASRLGGRRRVTHIAFGGGSPNSLPLVDWVR
LNHQLLLCFDTSDAALSVEIDPRRLDRAWIDAMGQIGVSRVNLGVQTLAPHVQQAIGRVQ
PVEMVEAAVEGLRRAQIDVGFDLMYGLPGQSEADLIETLETSIRLAPSRIALFGYAHMPH
LLHRQRRISQADLPDMAMRFAMATQGHAMLTAAGYRAIGFDHFALPGDPLAKAATTGRLR
RNFQGFTEDDSDVLIGLGASAISQFPDLIVQNEKNAGPYRDMIGQQRLTATRGVRRSADD
QKRGRLIERLLCDGAAPSDGVVQSRDLAKFINMGIARLHDGMIEIRPEAQPYARSVAACF
DAYLRPQETRFSHAV
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgttccgataccatcccgatctgctggcggccccggtgccgcgctacaccagctatccg
accgccgcacaattcaccgacgccgtcggcgccgaagcgctggaggaacggctcgacagg
ctaccgcaggatgcggggatctcgctctatctgcacatcccctattgccacgacatctgc
tggtattgcgggtgcaacactggtgctgcgacacggccccgccgcctcgccacctatgtc
gatgcgctggagcaggagatagcgctagtcgcgtcccgcctgggcgggcggcggcgcgtc
acccatatcgcatttggcgggggcagcccgaattcgctgccgctggtcgattgggtgcgc
ctcaatcaccagttgctgctgtgctttgacaccagcgatgctgcgctatcggtcgaaatc
gatccccgccgcctcgaccgggcgtggatcgacgccatggggcagatcggcgtttcgcgg
gtcaatctgggcgtccagacccttgcgccgcatgtccagcaggccatcgggcgcgtgcag
cctgtcgagatggtggaagcggcggttgaggggctgcgccgggcacagatcgacgtgggt
ttcgaccttatgtacggcctgccgggtcagagcgaagcggacctgattgaaacgctggag
acgagcatccgtctggcgccatcgcgcatcgccctgttcggctatgcccatatgccccat
ctgctgcaccgccagcgccgcatatcgcaggccgatcttcccgacatggccatgcgtttt
gccatggcgacacaggggcatgcgatgctgaccgccgcaggctatcgcgccatcggtttc
gatcatttcgcactgcccggcgaccctttggcaaaggccgcgaccaccggcagattgcgg
cgtaatttccagggctttaccgaggatgacagcgacgtgctgatcggcctgggggccagt
gcgatcagccaatttcccgacctgatcgtgcagaatgagaaaaatgccgggccctatcga
gacatgatcggccaacagcggctgacggcgacccgcggcgtaaggcgcagcgccgacgat
cagaaacgcgggcgattgatcgagcgcctgctgtgcgacggcgcagcgccaagcgacggg
gtcgttcaatcgcgcgacctggccaaattcatcaacatggggattgcccgcctgcacgac
ggaatgatcgagatccgcccggaggcgcaaccctacgcccggtcggtcgcggcttgtttc
gacgcctatctccgcccgcaggaaacgcggttcagccatgccgtttag
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