Sphingobium xenophagum: CJD35_12555
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Entry
CJD35_12555 CDS
T05146
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
shyd
Sphingobium xenophagum
Pathway
shyd00550
Peptidoglycan biosynthesis
shyd01100
Metabolic pathways
shyd01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
shyd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CJD35_12555 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CJD35_12555 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
shyd01011
]
CJD35_12555 (mrdA)
Enzymes [BR:
shyd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CJD35_12555 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
shyd01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
CJD35_12555 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
ASY45794
UniProt:
A0A249MX99
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All DBs
Position
I:complement(2575627..2577705)
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AA seq
692 aa
AA seq
DB search
MKFPGSKRQIITEAAQSFTFTRRTMVLGALQGAVGAVLAARMAWISVAENEKYSLLSESN
RVNLTLIPPRRGWIIDRHGRPLANNRTDFRVDLIPQRVVDADATVKHLAQLLSLEPDEVD
RIREELDKSAGFRPVQVADKLTYDQYAAVSVRLPDLPGVAPSQGFSRHYPGGSTVGHLLG
YVGAATAEEYKERKNPLLITPGFKVGKDGLERAFDEHLTGKPGAKRVEVTARGKIVRELT
TRPDTPGHSIKLTIDAGLQEYAGRRLATQSGSVVVIDCANGDVLAMASMPSFDPNSFSDG
ISHMEWAMLSQDDHVPLRNKTLQGLYPPGSTVKPMVALALLEAGIGPQETVGCSGALRVG
NTLFHCHKRRGHGAVNMRTAIAQSCDIYFYQMAQRIGMDRIAAMARRCGMGQRFDLPFPS
QSYGTVPDPAWKLKKYDQKWQVYDTVNATIGQGYMLINPLQMAVMAARLATGKQLMPNFL
HGAKRPEPALVGASEEHLVVIRDAMSAVVNGGGTGGAARMSIPGVLIAGKTGTAQVRRIT
MAERAGGVRGNSSLAFKLRDHALFQGFAPFDNPRYAVACIIEHGGHLIRNEDAPMIASDT
LSYLFDPKKAMEKLETLEKGWGGTPSERQARQMGAFRLARAIEKGEVPPPAADNGSNAAA
AGNSATPAPAAPPTDESDDAPPPPGSNAADVP
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttcccggttccaaacgccagatcatcaccgaagccgcccagtccttcaccttc
acccgccgcaccatggtgctgggggcgctccagggggcggttggcgccgtgctggccgcg
cgaatggcgtggatcagcgtggcggagaatgagaaatattcgctcctgtcggagagcaac
cgcgtcaacctgacgctcattccgccacgccggggctggatcatcgaccgccatggtcgg
ccgctggccaacaaccgcaccgattttcgcgtcgacctgatcccgcagcgggtggtcgac
gccgatgcgacggtgaagcatctggcgcaattgctgagcctggagccggacgaggtcgat
cgcattcgcgaggaactggacaagtcggccgggttccgcccggtgcaggtcgccgacaag
ctgacctatgaccaatatgccgccgtcagcgtacgcctgcccgacctgccgggcgttgcg
cccagccagggcttttcgcgccattatccgggcgggtccacagtcggtcatttgctgggc
tatgtcggcgcggcgacggcggaggaatataaggaacgcaagaatccgctgctgatcacg
ccgggtttcaaggtcggcaaggacgggctggaacgcgcgtttgacgaacatctgaccggc
aagccaggggccaagcgggtcgaggtgacggcgcgcggcaagatcgtgcgggaactgacc
acccgacccgatacgcccggccattcgatcaagctgaccatcgacgcgggattgcaggaa
tatgccggacggcggctggcgacgcagagcggctccgtcgtcgtcatcgattgcgccaat
ggcgatgtgctggcgatggcgtcgatgcccagtttcgatccgaacagtttttcggacggc
atcagccatatggaatgggcgatgttgtcgcaggatgaccatgtcccgttgcgcaacaag
acgttgcaggggctttatccccccggatcgaccgtcaagccgatggtggcgctcgcgctg
ctggaagcgggcatcgggccgcaggaaacggtcggttgctccggggcgctgcgcgtcggc
aatacgctgttccactgccacaagcggcgcggccatggcgcggtcaacatgcggaccgcc
atcgcccagagctgcgacatatatttctaccagatggcccagcgcatcggcatggaccgg
atcgcggcgatggcgcgtcggtgcggcatgggccagcgtttcgacctgcccttccccagc
caaagttacggcacggtgcccgacccggcctggaagctgaagaaatatgaccagaaatgg
caggtgtatgacacggtgaacgccaccatcggtcagggctatatgctgatcaatccgctg
caaatggcggtgatggccgcgcggctggcgaccggcaagcaactcatgcccaatttcctg
cacggcgcgaagcgtcccgagcctgcgttggtcggcgcatccgaagagcatctggtcgtc
atccgcgatgcgatgagcgcagtcgtcaatggcggcggcacgggcggggccgcgcgcatg
tcgatccccggcgtgctgatcgccggcaagaccggcaccgcgcaggtccggcgcatcacc
atggccgagcgcgcgggcggggtacgcggcaacagctcactggcgttcaagctgcgcgac
catgccctgttccaggggttcgcgccgttcgacaatccgcgctatgcggtcgcctgcatc
atcgaacatggcgggcatttgatccgtaacgaggacgcgccgatgatcgccagcgatacg
ctgtcctatctgttcgatcccaaaaaggcgatggagaagctggagacgctggaaaagggc
tggggcggcaccccatcggaaaggcaggcgcggcaaatgggcgcgttccggctggcccgc
gcgatcgagaagggtgaagtcccgccacctgccgccgacaatggcagcaacgcagcagcg
gcgggcaacagcgccacgccagcaccagcggcaccaccaaccgacgagtcggacgacgcc
cctcctccccccggcagcaatgcggcggatgtgccatga
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