Sphingobium xenophagum: CJD35_12575
Help
Entry
CJD35_12575 CDS
T05146
Name
(GenBank) DNA mismatch repair endonuclease MutL
KO
K03572
DNA mismatch repair protein MutL
Organism
shyd
Sphingobium xenophagum
Pathway
shyd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
shyd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CJD35_12575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shyd03400
]
CJD35_12575
DNA repair and recombination proteins [BR:
shyd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Molecular matchmaker
CJD35_12575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
ASY45177
UniProt:
A0A249MVJ9
LinkDB
All DBs
Position
I:2580391..2582175
Genome browser
AA seq
594 aa
AA seq
DB search
MSIRRLPEHLVNRIAAGEVVERPASALKEIVENALDAGATRIAIRLSNGGLDRIEVSDDG
VGMDSVDMALALERHATSKMPDDDAIENVATLGFRGEALPSIASVARLSIDSRRQGGEGW
NRTVDNGQLVAEGPAALPPGTRVTIEQLFAKVPARRKFLRSAKAEYAACLDIVRRLAMAH
PAVAFALEHDGRRTLGVQAGHAREERVAALTDRALADNHVIISLAREGVRLSGVASIPTY
NRGVGDHQYLFVNGRPVRDRLLIGALRGAYADMLARDRHPVVALFLDVPPLDVDVNVHPA
KTEVRFRDPAMIRGMIISGLRRALDEQGFRAVQNADPAALSAWRAEPVSPTPIGAMPIFD
AAAVSYNPLAASSFGDRRSSFMTPPPQARAEPAMAPAPEGQSFPLGVARGQVARTYIVAE
AEDGLVIVDQHAAHERLTLERMRRAMEGQGVQSQALLLPEVVELEEPACDRLESRAPELH
DFGLDLERFGPSAMLVRAVPAMLGQSDVQGLVKDLADDLAAYDSALSLKERLDLVAATMA
CHGSVRAGRVLSVAEMNALLREMEVTPRSGQCNHGRPTWVKLGHGDIEKLFGRK
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatacgccgcctgcccgaacatctggtcaatcgtatcgctgccggtgaagtggtt
gaaagacccgccagcgcgctcaaggaaattgttgaaaatgcgttggacgctggcgcgact
cgcatcgccatccgcctgtcgaacggcggactcgaccggatcgaggtgagcgacgacggt
gtcggcatggattcggtcgacatggcgctggcgctggaacggcacgcgacatccaagatg
cccgatgacgatgccattgaaaatgtggccactctgggtttccgtggcgaagcgctgccg
tccatcgccagcgtcgcgcgcctgtcgatcgacagccggcggcagggcggggagggctgg
aaccgcacggtcgacaatgggcaattggtggcggaggggccagccgccttgccccccggc
acccgcgtcaccatcgaacagctttttgccaaggtgcccgcccgccgcaaattcctgcga
tcggccaaggcagaatatgccgcctgtctcgacatcgtccgccgtctcgcaatggcacat
cccgcggtcgctttcgcgctggaacatgacggtcgccggacgctgggggtgcaggcgggc
catgcgcgggaggaaagggtggctgcgctgacggaccgggcgctggcggacaatcatgtc
atcatcagcctggcacgcgaaggcgtgcgcctgtcgggcgtcgcctccattcccacctac
aaccgcggcgtgggcgatcatcaatatctgttcgtcaatggccgccccgtgcgcgaccgg
ctgctcatcggcgcgttgcgcggcgcctatgccgacatgctggcgcgcgatcggcatccg
gtggtggccctgttcctcgacgtcccgccgctcgatgtggacgtcaatgtccatcccgcc
aagacggaggtgcgcttccgtgatcccgcgatgatccggggcatgatcatttcgggcctg
cgccgcgcgctcgacgaacagggctttcgcgcggtccagaatgccgatcccgccgcgctg
tccgcctggcgcgccgaacccgtctcgcccacgccgatcggcgcgatgccgatctttgac
gccgcggcggtcagctacaacccgctcgccgcatcttccttcggcgatcgccgttccagc
ttcatgaccccgccgccgcaggcgcgcgccgaacctgccatggcccccgccccggaaggg
cagagcttcccgctgggcgtcgcgcgcggccaggttgcgcgcacttacatcgtcgcggaa
gcggaggacggcctggtcatcgtcgaccagcacgccgcccatgaacggctgacgctggaa
cggatgcgccgggcgatggaagggcagggcgtccagtcgcaggcgctgctgctccccgaa
gtcgtcgaactggaagaacccgcctgcgaccggctggaatcgcgcgcccccgaattgcac
gacttcggcctcgacctcgaacgcttcggcccgtccgccatgctggtccgcgccgtaccg
gcgatgctcggtcagtcggatgtccagggcctcgtcaaggatctggccgacgatctcgcc
gcctatgacagcgccctgtcgctgaaggaacggctggatctcgtcgccgcgaccatggcc
tgccacggatcagtccgcgcaggccgggtgctcagcgtcgcggaaatgaacgccctgctg
cgcgaaatggaagtcacgccacgctctggccagtgcaaccatggccgcccgacctgggtg
aagctgggccatggcgacatagaaaaattgttcggaaggaagtga
DBGET
integrated database retrieval system
