Sphingobium xenophagum: CJD35_12710
Help
Entry
CJD35_12710 CDS
T05146
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
shyd
Sphingobium xenophagum
Brite
KEGG Orthology (KO) [BR:
shyd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shyd03400
]
CJD35_12710
Enzymes [BR:
shyd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CJD35_12710
DNA repair and recombination proteins [BR:
shyd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CJD35_12710
Prokaryotic type
CJD35_12710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Usp
Motif
Other DBs
NCBI-ProteinID:
ASY45200
UniProt:
A0A249MV00
LinkDB
All DBs
Position
I:2609059..2610528
Genome browser
AA seq
489 aa
AA seq
DB search
MDLVATNMAACLGKMLYRSLGTGMIRLHCRMMTKPVLLWLRQDLRLSDQAALVAAVQAGP
VIPLYILDDDTPRHWAMGGAARWWLHHSLSRLDESLRAKGSRLILRQGKSADIIPQVAKQ
AGADSVYALHHYEPWWRNAEKAVGRQVDLHLHDGGLLLPPGAVRTGGGGIYRIYTPFARA
VMTHMPPPAPCPAPDDIPAPSSWPTSDSLDDWALLPTSPDWATGFSKDWTPGEAGAQANL
ESFADEAPDYATGRNLPSIEGTSRLSPHLHFGEISPATVWHRLTGSDEGTTTFLKELIWR
DYAHNQIVERPDYGSANARADFDALPWRDLRQAKRDFTAWQRGCTGYPIVDAGMRQLWAT
GWMHNRVRMIAASFLIKHLLIDWRHGARWFLDTLVDASYANNSVNWQWVAGSGVDANMFV
RIMAPLVQSEKFDAAAYIRQWVPELADLSDTHIHDPDAHGVRPPAYPAKIVGHREGRERA
LAAYRDVKG
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggatttggtcgccacaaatatggcggcctgccttggcaagatgctttataggtcgctt
ggaaccggcatgatccggctgcattgcaggatgatgaccaaacccgtcctgctctggctc
cgccaggatcttcgcctgtcggatcaggctgcgctggtcgccgctgtccaggcagggccg
gtgatccctctctatatcctagacgatgacacgccgcgccattgggcaatgggcggcgcg
gcgcgctggtggctgcaccacagcctgtcgcggctggacgaaagcctccgcgcgaaagga
tcacgcctcattctgcggcagggcaaatcggcggacatcataccgcaggtcgcaaagcag
gcgggcgccgacagcgtatatgcgctccaccactatgaaccctggtggcgcaacgcggaa
aaggcggtcggcaggcaagtggacctgcaccttcatgatggcggcctgctcctgccgccc
ggtgcggtacggacagggggagggggcatctatcgcatctatacgcctttcgcccgcgcg
gtgatgacccacatgcccccgcctgcgccttgccccgccccggacgatattcccgcgcca
tcatcctggccgacgagcgattcgctggacgactgggcgctgctgccgaccagcccagac
tgggcgaccggcttttcaaaggactggacgccgggagaggccggcgcgcaggccaatctg
gaaagcttcgccgatgaagcgcctgactatgccaccggccgcaatctgccctcgatcgag
gggacgtcccgcctttcgccccaccttcatttcggggaaatctccccggccacggtctgg
catcgcctgacaggttcggatgaaggaacaacaaccttcctcaaggaactgatctggcgc
gattatgcacataaccagatcgttgagcggcccgactatggctccgccaacgcccgcgcg
gatttcgacgcgctgccctggcgcgacctgagacaggcgaaacgtgatttcactgcttgg
cagcgcggctgtacaggctatccgattgtcgacgccgggatgcgccagctttgggcgacg
ggctggatgcataaccgcgtccgcatgattgcggcgagcttcctgatcaagcatctgctg
atcgactggcgtcacggtgcgcgctggttcttggatacgctggtcgatgccagctacgcc
aacaacagtgtcaactggcaatgggtggcgggcagcggggtggatgccaatatgttcgtc
cgcatcatggccccgctggtccaatcggaaaagttcgacgcggctgcctatattcgccaa
tgggtgccggaacttgccgacctgtcagacacccatattcatgaccccgacgcccatggc
gtccgtcccccggcctatccggcaaagattgtcggccatcgcgaaggccgcgaacgcgcg
ctggccgcctatcgcgacgttaagggatga
DBGET
integrated database retrieval system
