KEGG   Sphingobium xenophagum: CJD35_12925
Entry
CJD35_12925       CDS       T05146                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
shyd  Sphingobium xenophagum
Brite
KEGG Orthology (KO) [BR:shyd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:shyd03019]
    CJD35_12925 (rnc)
   03009 Ribosome biogenesis [BR:shyd03009]
    CJD35_12925 (rnc)
   03036 Chromosome and associated proteins [BR:shyd03036]
    CJD35_12925 (rnc)
Enzymes [BR:shyd01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     CJD35_12925 (rnc)
Messenger RNA biogenesis [BR:shyd03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     CJD35_12925 (rnc)
Ribosome biogenesis [BR:shyd03009]
 Eukaryotic type
  90S particles
   RNase
    CJD35_12925 (rnc)
 Prokaryotic type
  rRNA processing factors
   CJD35_12925 (rnc)
Chromosome and associated proteins [BR:shyd03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     CJD35_12925 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DND1_DSRM
Other DBs
NCBI-ProteinID: ASY45237
UniProt: A0A249MVQ6
LinkDB
Position
I:complement(2659867..2660550)
AA seq 227 aa
MNHKAPQPDTAGWLAALIGRPPRDPARFSQALTHGSANPVNYERLEFLGDRVLGLLVSEW
VFDRFAGEPEGKLSRRFNALVSGETCAEVARDAGVPAHLILGKQARDDGAANSDNVLGDV
MEALIGALYLEAGLDEARTLVRRLWADRVDTQTAAPRHPKSALQEWAAANKRKPPEYEIK
DRSGPQHALRFVVAVTIKGAGEASATGGSKQEAETAAAAALLEKLTG
NT seq 684 nt   +upstreamnt  +downstreamnt
ttgaaccataaggcgccccaacctgacacggcgggctggctggcggcgctgatcgggcgc
cccccgcgcgaccctgcgcggttcagccaggcgctcacccatggcagcgccaacccggtc
aattatgagcggctggaatttctgggcgaccgggtcttggggctgctggtatccgaatgg
gtgtttgatcgctttgccggtgaaccggaaggcaaattgtcgcgccgcttcaacgcgctg
gtgtcgggcgaaacctgtgccgaggtggcgcgcgacgcgggcgtgccggcccatctgata
ctgggcaagcaagcgcgcgacgatggcgcggccaatagcgacaatgtgctgggcgacgtc
atggaggcgctgatcggcgcgctctatctggaggctgggctggacgaagcccgcacgctg
gtgcgccgcctgtgggccgaccgcgtcgatacccagaccgccgcgccgcgccaccccaaa
tccgcgcttcaggaatgggccgccgccaacaagcgcaagccgcctgaatatgaaatcaag
gaccgatccggcccgcaacatgccctgcgcttcgtcgtcgccgtgacgatcaagggcgca
ggcgaggccagcgcgaccggcggatcgaagcaggaagcggagacagcggcggcagcagcg
ttgctggagaagctgacgggctaa

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