Sphingobium xenophagum: CJD35_12925
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Entry
CJD35_12925 CDS
T05146
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
shyd
Sphingobium xenophagum
Brite
KEGG Orthology (KO) [BR:
shyd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shyd03019
]
CJD35_12925 (rnc)
03009 Ribosome biogenesis [BR:
shyd03009
]
CJD35_12925 (rnc)
03036 Chromosome and associated proteins [BR:
shyd03036
]
CJD35_12925 (rnc)
Enzymes [BR:
shyd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
CJD35_12925 (rnc)
Messenger RNA biogenesis [BR:
shyd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CJD35_12925 (rnc)
Ribosome biogenesis [BR:
shyd03009
]
Eukaryotic type
90S particles
RNase
CJD35_12925 (rnc)
Prokaryotic type
rRNA processing factors
CJD35_12925 (rnc)
Chromosome and associated proteins [BR:
shyd03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
CJD35_12925 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
ASY45237
UniProt:
A0A249MVQ6
LinkDB
All DBs
Position
I:complement(2659867..2660550)
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AA seq
227 aa
AA seq
DB search
MNHKAPQPDTAGWLAALIGRPPRDPARFSQALTHGSANPVNYERLEFLGDRVLGLLVSEW
VFDRFAGEPEGKLSRRFNALVSGETCAEVARDAGVPAHLILGKQARDDGAANSDNVLGDV
MEALIGALYLEAGLDEARTLVRRLWADRVDTQTAAPRHPKSALQEWAAANKRKPPEYEIK
DRSGPQHALRFVVAVTIKGAGEASATGGSKQEAETAAAAALLEKLTG
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
ttgaaccataaggcgccccaacctgacacggcgggctggctggcggcgctgatcgggcgc
cccccgcgcgaccctgcgcggttcagccaggcgctcacccatggcagcgccaacccggtc
aattatgagcggctggaatttctgggcgaccgggtcttggggctgctggtatccgaatgg
gtgtttgatcgctttgccggtgaaccggaaggcaaattgtcgcgccgcttcaacgcgctg
gtgtcgggcgaaacctgtgccgaggtggcgcgcgacgcgggcgtgccggcccatctgata
ctgggcaagcaagcgcgcgacgatggcgcggccaatagcgacaatgtgctgggcgacgtc
atggaggcgctgatcggcgcgctctatctggaggctgggctggacgaagcccgcacgctg
gtgcgccgcctgtgggccgaccgcgtcgatacccagaccgccgcgccgcgccaccccaaa
tccgcgcttcaggaatgggccgccgccaacaagcgcaagccgcctgaatatgaaatcaag
gaccgatccggcccgcaacatgccctgcgcttcgtcgtcgccgtgacgatcaagggcgca
ggcgaggccagcgcgaccggcggatcgaagcaggaagcggagacagcggcggcagcagcg
ttgctggagaagctgacgggctaa
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