Sphingobium xenophagum: CJD35_13180
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Entry
CJD35_13180 CDS
T05146
Name
(GenBank) methionine--tRNA ligase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
shyd
Sphingobium xenophagum
Pathway
shyd00450
Selenocompound metabolism
shyd00970
Aminoacyl-tRNA biosynthesis
shyd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shyd00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
CJD35_13180
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CJD35_13180
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
shyd01007
]
CJD35_13180
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shyd03016
]
CJD35_13180
Enzymes [BR:
shyd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
CJD35_13180
Amino acid related enzymes [BR:
shyd01007
]
Aminoacyl-tRNA synthetase
Class I (U)
CJD35_13180
Transfer RNA biogenesis [BR:
shyd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
CJD35_13180
Prokaryotic type
Other AARSs
CJD35_13180
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1e
Anticodon_3
tRNA-synt_1f
Motif
Other DBs
NCBI-ProteinID:
ASY45282
UniProt:
A0A249MVG7
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All DBs
Position
I:2720996..2722564
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AA seq
522 aa
AA seq
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MSQPYTITTAISYPNGRPHIGHAYEVIATDAIARFQRMMGRDVFFQTGTDEHGLKMAQTA
RNRGIEPVALADEMSGYFRDMNDRLNISHDRFIRTSEAAHHRASQAIWQAMEANGDLYLD
RYEGWYSVRDEAFYDEKELTDGEGGAKLSPQGTPVEWTVEESWFFRLSNYQDKLLALYES
QPDFIRPDSRRNEILRFVEGGLSDLSISRTSFDWGVKVPGSDGHVMYVWVDALTNYLTGC
GYPDDADRMARYWAEGGDITHIIGKDIVRFHAVYWPAFLMSAKLPLPKQIFGHGFLLNRG
EKMSKSVGNVADPIELADRFGVDQLRYFLLSEVTFGNDGSYSAEAIVQRSNSDLGNAFGN
LAQRTLSFIAKNLDGRLPAIHGHDPADSELFDLIDRVVRTDMPAAMADLAPSVAIDAWLR
AAFACNQYIDAQAPWSLRKTDPQRMETVLATLYIAIAQLAVAVLPVIPASATALLDHMGI
PADKRSYNAIGDHWYSPLAESDFTLAAPKPLFPRLELTEADG
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagccctataccatcaccaccgccatctcctatcccaatggccgcccccatatc
ggccacgcctatgaggtgatcgcgaccgacgcgatcgcccgtttccagcgcatgatgggc
cgcgacgtcttctttcagaccggcacggacgaacatggcctgaaaatggcgcagacggcg
cggaaccgggggatcgaacccgtcgcgctggccgatgaaatgtcgggctatttccgtgat
atgaacgatcggcttaacatcagtcatgatcgtttcatccgcaccagcgaagcggcgcac
catcgcgccagccaggccatctggcaggcgatggaggccaatggcgacctgtatctggat
cggtatgagggctggtattcggtccgcgacgaagccttttacgacgaaaaggaactgacc
gacggggaagggggcgccaagctttcgccacagggcacgccggttgaatggacggtcgag
gaaagctggttcttccgcctgtccaactatcaggacaaattgctggcgctctacgaaagc
cagcccgatttcatccgtccggacagccgccgcaacgagattttacgtttcgtcgaaggc
ggcctttcggacctgagcatttcgcgcaccagcttcgactggggggtcaaggtgcccggc
agcgatggtcatgtcatgtatgtgtgggttgacgcgctcaccaactatctgaccggctgc
ggctatcccgatgatgccgaccgcatggcaagatattgggcggaaggcggcgacatcacg
catattatcggcaaggatattgtgcgttttcatgcggtttactggccagcctttctgatg
agcgcgaagctgcccttgcccaagcagatttttggtcatggcttcctgctcaaccggggc
gagaaaatgtccaaatcggtcggcaatgtcgccgacccgatcgaactggccgatcggttc
ggtgtggatcagttgcgctatttcctgttgtcggaggtcactttcggcaatgacggcagc
tatagcgcggaggcgatcgtccagcgctccaacagcgatctgggcaatgcgttcggcaat
ctggcgcagcggacgttgagcttcatcgccaagaatctggacggcagactgccggccatc
cacggacatgatccggcggacagcgagttgttcgatctgatcgaccgggtcgtgcgtacc
gacatgcctgccgccatggccgatctcgcgccgtccgtcgcgatcgacgcatggctgcgc
gccgcctttgcctgtaaccaatatatcgacgcccaggcgccatggtcattgcgcaagacc
gacccgcagcggatggagacggtgctggcgacgctctacatcgcgatcgcgcaactggcc
gtcgcggtcctgccggtcatccccgccagcgcgaccgcgctgctcgatcatatgggcatc
cccgccgacaagcgcagctacaacgcgatcggcgatcactggtattcgccactggccgag
agcgacttcaccctcgccgcgcccaagccgctctttcccaggctcgaactgaccgaagcg
gacgggtga
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