Sphingobium xenophagum: CJD35_13410
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Entry
CJD35_13410 CDS
T05146
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
shyd
Sphingobium xenophagum
Pathway
shyd00010
Glycolysis / Gluconeogenesis
shyd00020
Citrate cycle (TCA cycle)
shyd00260
Glycine, serine and threonine metabolism
shyd00280
Valine, leucine and isoleucine degradation
shyd00310
Lysine degradation
shyd00380
Tryptophan metabolism
shyd00620
Pyruvate metabolism
shyd00630
Glyoxylate and dicarboxylate metabolism
shyd00640
Propanoate metabolism
shyd00670
One carbon pool by folate
shyd00785
Lipoic acid metabolism
shyd01100
Metabolic pathways
shyd01110
Biosynthesis of secondary metabolites
shyd01120
Microbial metabolism in diverse environments
shyd01200
Carbon metabolism
shyd01210
2-Oxocarboxylic acid metabolism
shyd01240
Biosynthesis of cofactors
Module
shyd_M00009
Citrate cycle (TCA cycle, Krebs cycle)
shyd_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
shyd_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
shyd_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
shyd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
CJD35_13410 (lpdA)
00020 Citrate cycle (TCA cycle)
CJD35_13410 (lpdA)
00620 Pyruvate metabolism
CJD35_13410 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
CJD35_13410 (lpdA)
00640 Propanoate metabolism
CJD35_13410 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CJD35_13410 (lpdA)
00280 Valine, leucine and isoleucine degradation
CJD35_13410 (lpdA)
00310 Lysine degradation
CJD35_13410 (lpdA)
00380 Tryptophan metabolism
CJD35_13410 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
CJD35_13410 (lpdA)
00670 One carbon pool by folate
CJD35_13410 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shyd04147
]
CJD35_13410 (lpdA)
Enzymes [BR:
shyd01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
CJD35_13410 (lpdA)
Exosome [BR:
shyd04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
CJD35_13410 (lpdA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_binding_2
HI0933_like
NAD_binding_8
FAD_oxidored
DAO
GIDA
Lys_Orn_oxgnase
AlaDh_PNT_C
GMC_oxred_N
3HCDH_N
Amino_oxidase
2-Hacid_dh_C
Thi4
Motif
Other DBs
NCBI-ProteinID:
ASY45320
LinkDB
All DBs
Position
I:complement(2766884..2768299)
Genome browser
AA seq
471 aa
AA seq
DB search
MADTYDLIVLGSGPGGYVAAIRAAQLGLKTAIVERENLGGICLNWGCIPTKALLRSAEIF
HYMQHAKDYGLAAEKISADIEAVVKRSRGVAKQLNQGVTHLMKKNKIAVHMGDGKLTGKG
KLTVTKDGKSEELTAKHIIIATGARARDLPQLKADGKRVWTYRHAMTPPEMPTKLLVIGS
GAIGIEFASFYNDMGADVTVVEMMDRIVPVEDADVSAFLEKAVKKQGMTVLTGAKIEKIA
TSDKGVTATIKDKAGKAIEAEYSHVIVAIGIVPNVENLGLEDVGVEPDQRYHIKTDAYGR
TNVEGFWAIGDVTAPPWLAHKASHEGVIVAEAIAQALGNKDVHPHAMDVRNIPGCTYCHP
QIASVGLTEAKAKEAGYEVKVGMFPFIGNGKAIALGEAEGFTKTVFDAKTGELLGAHMIG
AEVTEMIQGYTIGKTLETTEAELMHTVFPHPTISESMHESVLAAYGRALHI
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggctgatacctacgatctcatcgtccttggctccggccccggcggctatgtcgccgcg
atccgcgccgcgcagcttggcctgaaaaccgccattgtcgagcgtgaaaatctgggcggc
atctgcctcaactggggctgtattcccaccaaggcgctgctgcggtcggccgagattttc
cattatatgcagcacgccaaggattatggcctggcggcggaaaagatcagcgccgacatc
gaagcggtggtgaagcgctcgcgcggtgtcgccaagcagcttaatcagggcgtgacgcac
ctgatgaagaagaacaagatcgccgtgcatatgggcgatggcaagctgaccggaaagggc
aagctgaccgtcaccaaggacggcaagtccgaagaactgaccgccaagcatatcatcatc
gcgacgggcgcccgcgcccgcgacctgccgcagctcaaggccgacggcaagcgcgtgtgg
acctatcgccacgccatgacgccaccggaaatgccgaccaagctgctcgtcatcggttcc
ggcgcgatcggcatcgaatttgccagcttctataacgacatgggcgctgacgtgaccgtc
gtggagatgatggaccggatcgtccctgtcgaggatgccgacgtttccgccttccttgaa
aaggcagtcaagaagcagggtatgaccgtgctgaccggcgcgaagatcgagaagatcgcg
accagcgacaagggcgtgaccgcgacgatcaaggacaaggctggcaaggcgatagaggcc
gaatatagccatgtcatcgtcgccatcggcatcgtccccaatgtcgaaaatctgggtctg
gaagatgtcggcgtcgaacccgaccagcgctatcatatcaagaccgatgcctatggccgc
accaatgtcgagggtttctgggcgatcggcgatgtgaccgctccgccatggcttgcgcac
aaggcgagccatgagggcgtgatcgtggccgaagccatcgcgcaggcgctgggcaacaag
gatgtccacccccatgcgatggatgtgcgcaacatccccggctgcacctattgccatccg
cagatcgccagcgtcggcctgaccgaagcaaaggccaaggaagcgggttacgaggtcaag
gtcggcatgttcccgttcatcggtaatggcaaggcaatcgcgcttggcgaagcggaaggc
ttcaccaagaccgtgttcgacgccaagaccggcgagttgctgggcgcgcacatgatcggc
gcggaagtcacggagatgatccagggctatacgatcggcaagacgctggaaacgaccgag
gcggaactgatgcacacggtattcccgcatccgaccatttcggaatcgatgcatgaaagc
gtgctggcggcctatggccgtgcgctccatatctga
DBGET
integrated database retrieval system