KEGG   Sphingobium xenophagum: CJD35_14525
Entry
CJD35_14525       CDS       T05146                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
shyd  Sphingobium xenophagum
Brite
KEGG Orthology (KO) [BR:shyd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:shyd03032]
    CJD35_14525
   03036 Chromosome and associated proteins [BR:shyd03036]
    CJD35_14525
   03400 DNA repair and recombination proteins [BR:shyd03400]
    CJD35_14525
DNA replication proteins [BR:shyd03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    CJD35_14525
Chromosome and associated proteins [BR:shyd03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    CJD35_14525
DNA repair and recombination proteins [BR:shyd03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      CJD35_14525
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 HU-CCDC81_euk_1 GTP_EFTU_D2 DUF2267 VWA_3 Glyco_transf_29
Other DBs
NCBI-ProteinID: ASY45511
UniProt: A0A249MVW7
LinkDB
Position
I:complement(2978499..2978771)
AA seq 90 aa
MNKQDLISAVADSSGLSKSDASKAVEGVFDAITGALKKGDEVRLVGFGTFSVSQRKASTG
RNPRTGETMTIKASAQPKFKAGKGLKDSVN
NT seq 273 nt   +upstreamnt  +downstreamnt
atgaacaagcaggatcttatcagcgctgtcgcggacagcagcggtctcagcaaaagcgac
gccagcaaggccgtcgaaggtgtattcgacgccatcaccggtgcgttgaagaagggcgac
gaagtgcgcctggttggttttggcacattttccgtttcgcagcgcaaggcgtcgaccggt
cgcaacccgcgcaccggcgagacgatgacgatcaaggcgtcggcccagcccaagttcaag
gctggcaagggtctcaaggattcggtcaactga

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