Sphingobium xenophagum: CJD35_14525
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Entry
CJD35_14525 CDS
T05146
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
shyd
Sphingobium xenophagum
Brite
KEGG Orthology (KO) [BR:
shyd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shyd03032
]
CJD35_14525
03036 Chromosome and associated proteins [BR:
shyd03036
]
CJD35_14525
03400 DNA repair and recombination proteins [BR:
shyd03400
]
CJD35_14525
DNA replication proteins [BR:
shyd03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CJD35_14525
Chromosome and associated proteins [BR:
shyd03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CJD35_14525
DNA repair and recombination proteins [BR:
shyd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CJD35_14525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
GTP_EFTU_D2
DUF2267
VWA_3
Glyco_transf_29
Motif
Other DBs
NCBI-ProteinID:
ASY45511
UniProt:
A0A249MVW7
LinkDB
All DBs
Position
I:complement(2978499..2978771)
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AA seq
90 aa
AA seq
DB search
MNKQDLISAVADSSGLSKSDASKAVEGVFDAITGALKKGDEVRLVGFGTFSVSQRKASTG
RNPRTGETMTIKASAQPKFKAGKGLKDSVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcaggatcttatcagcgctgtcgcggacagcagcggtctcagcaaaagcgac
gccagcaaggccgtcgaaggtgtattcgacgccatcaccggtgcgttgaagaagggcgac
gaagtgcgcctggttggttttggcacattttccgtttcgcagcgcaaggcgtcgaccggt
cgcaacccgcgcaccggcgagacgatgacgatcaaggcgtcggcccagcccaagttcaag
gctggcaagggtctcaaggattcggtcaactga
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