Sphingobium xenophagum: CJD35_14540
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Entry
CJD35_14540 CDS
T05146
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
shyd
Sphingobium xenophagum
Pathway
shyd03030
DNA replication
shyd03430
Mismatch repair
shyd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shyd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CJD35_14540
03430 Mismatch repair
CJD35_14540
03440 Homologous recombination
CJD35_14540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shyd03032
]
CJD35_14540
03400 DNA repair and recombination proteins [BR:
shyd03400
]
CJD35_14540
Enzymes [BR:
shyd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CJD35_14540
DNA replication proteins [BR:
shyd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CJD35_14540
DNA repair and recombination proteins [BR:
shyd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CJD35_14540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
DNAX_ATPase_lid
AAA
AAA_5
AAA_22
RuvB_N
AAA_30
AAA_assoc_2
AAA_16
AAA_19
AAA_14
Cdc6_lid
AAA_24
AAA_18
DUF815
Glyco_tranf_2_5
AAA_2
PIF1
Adeno_E1B_55K_N
Motif
Other DBs
NCBI-ProteinID:
ASY45514
UniProt:
A0A249MWH1
LinkDB
All DBs
Position
I:complement(2981832..2983442)
Genome browser
AA seq
536 aa
AA seq
DB search
MSDSPQPYRVLARKYRPRNFRELIGQDAMVQTLGNAIRRGRLAHAFLMTGVRGVGKTSTA
RLIAKALNCIGGDGQGGPTIDPCGVCEPCRAIAEGRHIDVVEMDAASHTGVDDVREIIEA
VRYAAVSARYKIYIIDEVHMLSKNAFNALLKTLEEPPAHVKFLFATTEVNKVPVTVLSRC
QRFDLRRIPAELLAGHFAHVVEAEGVAAEADALSLIAQAAEGSARDGLSILDQAIAHAEM
GEGEPVVTATQVRDMLGLSDRGSVRRLLGLLLEGDTAALLGGARDQYALGVEPLALMRGL
LELVHAVTLVKAGRDIASPGQSAEEREMLADWASHLGFAPLHRLWQLLLKGHDEVAGAIL
PIESCEMALLRVMHAATMPDPGELARLLREGGPVAAATPGAVAAAPSAGPAAKLPATFED
LIEALWQRGKGQLAQELHDCVGLVRYAPPELDYRATPQLPSDFAARLTQALREMTGIGWR
VAVSDAAAQPTLLEREEAAKADARAEILEIPVVKAAMAAFPDAALVETDQPEQWSA
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattccccccagccctatcgcgtccttgcgcgcaaatatcggccgcgcaatttt
cgcgagttgatcggccaggacgcgatggtccagacgctgggcaatgcgatcaggcgggga
cggctggcccatgcctttctgatgaccggggtgcgcggggtcggcaagacatcgaccgcg
cggctgatcgccaaggcgttgaactgcattggcggggatgggcagggcgggccgacgatc
gacccgtgcggcgtgtgcgagccgtgccgcgcgattgccgaagggcggcatatcgacgtg
gtcgaaatggatgcggccagccataccggcgtcgacgatgtgcgcgagatcatcgaggcg
gtgcgctatgccgccgtgtcggcgcgctacaagatctacattatcgacgaagtgcacatg
ctctccaaaaatgcgttcaacgcgctgttgaaaacgctggaggagccgcctgcccatgtg
aaattcctgttcgccacgaccgaggtgaacaaggtgccggtgacggtgctgtcgcgctgc
cagcggttcgatctgcgccggattccggctgaattgctcgcggggcatttcgcccatgtg
gtggaggccgaaggcgtcgcggcggaggcggacgcgctgtcgctgatcgcgcaggcggcc
gaaggatcggcccgcgacgggctgtcgatactcgaccaggcgattgcccatgccgagatg
ggcgagggcgagccggtggtcacagcgacccaggttcgcgacatgctgggcctgtcggat
cgcggatcggtgcgccggttgctggggctgttgctggagggcgacactgccgccttgctg
ggcggtgcgcgcgatcaatatgcgctgggggtggagccgctggcgctgatgcgcgggctg
ctggagctggtgcatgccgtgacgctggtgaaggcggggcgcgacattgccagccccggc
cagtcggctgaggagcgcgagatgctggccgactgggcgtcgcacctcggcttcgcgccc
ctgcatcgcttgtggcagttgctgctgaaaggtcatgacgaggtggcgggagcgatcctg
ccgatcgaaagctgtgaaatggcgctgttgcgggtgatgcacgcggcgaccatgcccgat
ccgggcgaactggcgcggctattgcgcgagggcgggcctgtcgcagcagcgacgccgggc
gcggttgccgccgcgccatcggctggcccagccgcgaagctgcctgcgacgttcgaggat
ttgatcgaggcgctgtggcaaaggggcaaggggcaactggcgcaggaactgcatgactgc
gtcgggttggtccgttatgcgccgcctgagctggattatcgcgcgacgccgcaattgccg
tccgatttcgcggcgcgactgacccaggcgttgcgggagatgacgggcatcggctggcgc
gtggcggtgagcgatgcggcggcgcaaccgaccttgctggaacgggaggaagcggccaag
gccgacgcccgcgccgaaattctggaaattccggtggtcaaggcggcaatggccgctttc
cccgacgctgcgctggtcgaaaccgatcagccggaacaatggagtgcatga
DBGET
integrated database retrieval system
