Sphingobium xenophagum: CJD35_14585
Help
Entry
CJD35_14585 CDS
T05146
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
shyd
Sphingobium xenophagum
Pathway
shyd00260
Glycine, serine and threonine metabolism
shyd00460
Cyanoamino acid metabolism
shyd00630
Glyoxylate and dicarboxylate metabolism
shyd00670
One carbon pool by folate
shyd00680
Methane metabolism
shyd01100
Metabolic pathways
shyd01110
Biosynthesis of secondary metabolites
shyd01120
Microbial metabolism in diverse environments
shyd01200
Carbon metabolism
shyd01230
Biosynthesis of amino acids
shyd01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
shyd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CJD35_14585 (glyA)
09102 Energy metabolism
00680 Methane metabolism
CJD35_14585 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CJD35_14585 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
CJD35_14585 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CJD35_14585 (glyA)
Enzymes [BR:
shyd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
CJD35_14585 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
ASY45521
UniProt:
A0A249MVX7
LinkDB
All DBs
Position
I:2988975..2990276
Genome browser
AA seq
433 aa
AA seq
DB search
MSIDTLAPAIRQDGFFSESLASADPEIFGAIGNELKRQQDKIELIASENIVSKAVLEAAG
SIFTNKYAEGYPGKRYYGGCEYADVVETLAIERAKQLFGANFANVQPNSGSQMNQAVFLA
LLQPGDTFMGLDLSSGGHLTHGSPVNMSGKWFNPVPYGVRADDHLIDMDEVARIARECKP
KLIICGGTAYSRVWDFPRFREIADEVGAYLLADMSHFSGLVAGGAHPSPVPHAHVTTTTT
HKSLRGPRSGIVLCNDEAIAKKINSAIFPGMQGGPLMHIIAAKAVAFKEALSPEFKAYAH
QIVANARTLAATLADAGLSIVSGGTDNHLMLVDLRAKNTTGKAAEKALDRAFITCNKNNV
PFDTASPFVTSGVRLGTPAGTTRGFGEAEFREIGELIAQVVEGLKRNGDEGDGQVEAHVR
DKVLALTSRFPIY
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcgacaccctcgcccccgccatccgccaggacggctttttcagcgaaagcctt
gccagcgcggacccggaaatcttcggtgcgatcggcaatgagctgaagcgtcagcaggac
aagatcgagctgatcgcgtccgaaaacatcgtgtcgaaggcggtgctggaagccgctggc
tccatcttcaccaacaaatatgccgaaggctatccgggcaagcgctattatggcggctgc
gaatatgccgatgtggtcgaaacgctggcgatcgagcgcgccaagcaattgttcggcgcc
aatttcgccaatgtgcagcccaatagcggcagccagatgaatcaggccgtgttcctggcg
ctgctccagccgggcgataccttcatgggtctcgacctgtcgtcgggtggccacctgacc
catgggtcgccggtcaatatgagcggcaaatggttcaacccggttccctatggcgtgcgc
gccgacgatcatctgatcgacatggacgaagtcgcccgcatcgcccgcgagtgcaagccc
aagctcatcatctgcggcggcaccgcttactcgcgcgtatgggatttcccgcgcttccgc
gagattgccgacgaagtgggcgcctatctgctcgccgacatgtcgcatttctccggcctg
gtcgcgggcggcgcgcatccctcgcccgtccctcatgcccatgtcaccaccaccacgacc
cacaagtcgctgcgtggcccgcgctccggcattgtcctgtgcaatgacgaagcgatcgcc
aagaagatcaacagcgccatcttccccggcatgcagggcggcccgctgatgcacatcatc
gcggccaaggcggtcgcattcaaggaagcgctcagccctgaattcaaggcctatgcccac
cagatcgtcgccaatgcgcggacgctggccgccacgctggccgatgctgggctgtcgatc
gtatcgggcggcaccgacaatcatctgatgctggtcgatctgcgcgccaagaacaccacc
ggcaaggccgctgaaaaggcgctcgaccgcgctttcatcacctgcaacaagaataatgtg
ccgttcgacaccgccagcccgttcgtgacgtcgggcgtccgccttggcacccccgctggc
accacccgcggttttggtgaagcggaattccgcgagatcggcgaactgatcgcgcaggtc
gtcgaagggctcaagcgcaacggcgacgaaggggacggccaggtcgaagcccatgtgcgt
gacaaggtgctggccctgacaagccgcttcccgatttattga
DBGET
integrated database retrieval system