Sphingobium xenophagum: CJD35_15325
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Entry
CJD35_15325 CDS
T05146
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
shyd
Sphingobium xenophagum
Brite
KEGG Orthology (KO) [BR:
shyd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shyd02000
]
CJD35_15325
Transporters [BR:
shyd02000
]
Other transporters
Pores ion channels [TC:
1
]
CJD35_15325
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
DUF1495
Motif
Other DBs
NCBI-ProteinID:
ASY46367
UniProt:
A0A249MYW9
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All DBs
Position
II:complement(103866..106262)
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AA seq
798 aa
AA seq
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MSRKAVTLGAIGMGALVAAMAQPVYAQQPQSGASEGIQDIVVTARRTEESLQTTPIAVTA
LTPEALTTAKVENVVDLQRTAPGLVIGRGSAGGDGIVFVAIRGQGNLQPILANDPAVATY
IDGIYIPRPSTGMTDIQDVQRLEVLRGPQGTLFGRNTTGGAINIVTNDPNDQLSGAFKAE
FGNYSTLGAQANINVPLAEGLAIRLSGAISDRDGYGDNFATHRDFSDNNSKFLRGKLKYE
GNGWDLTLSGDWNRQYNHGQQIALWAFNPAIVPAAFQPGLTAGLLTKDHWWGNTATGTSV
PATIGTLTPEARALYGVQPFNTLEVYGFSGTLNIELGGLNFKSITGYRHSMNYGQNDTDG
TAVPLLATFAGSGSYYVSQEFQLSGNITDSLSFITGAYAGKESGYEFSRSQIFGGLIRDS
NADVTNKTFGLFAQAYYELTPKLRAVGGFRYTWDTRDSVLHNAQVYGLPYNVAVAGTPTG
INCTVTPTSPVTATSCNQEQNAKFDYPAWNLGIDWQASNNLFLYAATRGAAKAGGWNLRA
GGLPAFSPEKVKDVEAGLKVDLFDRRLRFNTAVFHTWKDDNQAIVNSFVTGIGVTQYIQN
NGKVRIWGMENEITAVPWEGMTLSLNGSLQDGKYVKGSFSEIQVVAGSGCTNSAGVANGC
VVDLSGLPLLQLPKKQLNVSATQKIPLGGGTLAVTGAYSYVGGQHFDAVRAADQASAATK
SAYDTENRLGFVPGYGIFNGRIAFQLENPNVEVAVYGRNITNKKYLLRRFPDLYRTLGIA
AAYVGQPVTYGVETTFKF
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgagcaggaaggccgtcactctgggcgcgatcggcatgggcgcgctcgtcgccgccatg
gcgcagcccgtttatgcgcagcagccgcaatcgggcgctagcgaaggcattcaggatatc
gtcgtcacggcgcgccgcactgaagaaagcctccagacgaccccgatcgccgtcacggcg
ctaacccccgaagccttgacgacggccaaggtggaaaatgtcgtcgaccttcagcgcacc
gcgccgggcttggtcatcggccgcggttccgccggcggcgacggcatcgtcttcgttgcc
atccgcggtcagggcaatctccagcctattctcgccaacgatccggcggtcgccacttat
attgacgggatctacatccctcggccctcgacgggcatgaccgacattcaggacgtgcaa
cggctggaagttctgcgcgggccgcagggcacgctctttggccgcaatacgaccggcggc
gcgatcaacatcgttaccaatgatcccaacgaccagctcagcggcgccttcaaggcggag
tttggcaattacagcacgctgggtgcgcaggccaatatcaatgtgccgctggcagagggg
ctcgcaattcgcctgagcggcgcaatcagtgaccgggacggctatggcgacaacttcgcc
acccaccgcgacttttccgataacaacagcaagttcttgcgcggcaagctgaaatatgaa
ggcaatggctgggatttgaccctttcgggcgactggaaccgtcagtacaaccatggtcag
cagatcgcactttgggccttcaatccggcgatcgtccccgccgccttccagccgggcctg
acggcgggcctgctgaccaaggaccattggtggggcaacaccgcgaccgggacatcggtc
ccggccactatcggcacgctcacccctgaagcgcgggctctctatggcgtgcagccattc
aatacgctggaagtatatggcttttccggcacgctcaacatcgaactgggcggcctgaac
ttcaagtcgatcaccggctatcgccattcgatgaactatggccagaatgatacggacggt
acggccgtgccgttgctggcgacctttgcggggtctggatcctattatgtttctcaggaa
ttccagctttccggcaatatcaccgacagccttagcttcatcacgggcgcctatgccggc
aaggaaagcggctatgaattcagtcgctcgcagattttcggcggactcatccgcgattcc
aatgccgacgtcaccaacaagaccttcggtctgttcgcgcaggcctattatgaactgacg
ccgaagctgcgtgcggtcggcggcttccgttatacctgggacacccgcgacagcgtgctg
cacaatgcacaggtatatggtctgccgtataacgtcgccgtggcgggcacgccgaccggc
atcaactgcaccgtgacgccaacgagccccgtgacggccaccagctgcaatcaggagcag
aatgccaagttcgactatccagcctggaacctgggtattgactggcaggcgagcaacaat
ctcttcctttatgccgcgacccgcggcgcggccaaggctggcggctggaacctgcgcgcc
ggtggtctgcccgccttttctcctgaaaaggtcaaggacgtcgaggccggcctgaaggtc
gatctcttcgaccgccgcctgcggttcaacacggcggtcttccatacctggaaggatgac
aatcaggcgatcgtcaacagcttcgtgaccggcatcggcgttacccaatatatccagaat
aatggcaaggtccgcatctggggcatggaaaatgaaatcacggccgtgccgtgggaaggt
atgacgctcagcctcaatggctcgctgcaagacggcaaatatgtgaagggcagcttcagc
gaaatccaggtggtggccggcagcggatgcaccaacagcgccggggtcgccaacggctgc
gtcgtcgacctgagcggcctgccgctgctgcaattgcccaagaagcagctgaacgtcagc
gccacgcagaaaattccgctgggtggcggcacgctcgccgtcactggcgcctattcctat
gtcgggggtcagcatttcgatgcggtccgggcggcagatcaagcgtcggcggcgaccaag
tccgcttacgacacggaaaaccgcctcggtttcgtacctggctatggcatcttcaacggg
cgtatcgcgttccagcttgaaaatcccaatgtcgaagtggcggtctatggccgcaacatc
acgaacaagaaatatctgctgcgccgcttccccgatctctatcggacattgggcattgca
gccgcctatgttggccagccggtcacctatggcgttgaaacaacgtttaaattctaa
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