Sphingobium xenophagum: CJD35_16275
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Entry
CJD35_16275 CDS
T05146
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
shyd
Sphingobium xenophagum
Brite
KEGG Orthology (KO) [BR:
shyd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shyd02000
]
CJD35_16275
Transporters [BR:
shyd02000
]
Other transporters
Pores ion channels [TC:
1
]
CJD35_16275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Chlam_OMP6
Motif
Other DBs
NCBI-ProteinID:
ASY46059
UniProt:
A0A249MY70
LinkDB
All DBs
Position
II:complement(299685..302078)
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AA seq
797 aa
AA seq
DB search
MSHIWKSAFRSNAACIAMMAAMAAGPALAQDASAPEQAADQSNQSADIIVTAQFRQQNLQ
DTPIAITAVSSETLAARSQTSVTDLGQFAPNVALAPATSLQGNSVAAFIRGVGQLDSSFA
LEPGVGIYIDDIYYGTTYGAVMDLTDLERVEVLRGPQGTLAGKNSVGGAVKLFSKKPDAT
AGGFIEATYGSYDRLELRGSANIPLSDSLFLRVSGVSKNVDGYMKLLDYGCANPASGIAP
TGTNDKGCQVGTEGGIDVMALRAALRFAPVGSPLEVNIVADVSKDNSEAVATKLLYANNP
LVRSYVPGNPTAGIPFDSRFITASKSYTSYANYATGGNYTTVFGIPTQVAPGGFSASPTS
SVKSWGIAGTIDYDLSDMLKLKSITGYRKADGTSAIDVDGSPLAILLQQFNYSHEQFTQE
LRLSANFNDAVDLTVGGFYYKATDLLSGRSAIPTLLFDFLVDDVVKNRSASAFAHAEFHV
TDAFNVIAGLRYTDDKKTYNYSRRNIDGSLPSGAFFTPNFLLAGLDGLSGTFKGDRLDYR
LGVNYRWNDQLMTYAQVSTGFKGGGINPRPSAPDQVQTFGPEKLTTYEAGFKADLMGRML
RLNGAVFLNDYKDMQLVRYQCPESVVFSCSVPSNAGDARVLGWELEASLRPTDGLSIDAS
AGYLDFDYKKITNPATLVTKNMIAPFISKWQLSAGIQYEADLAGSGTLTPRIDWSWRSNY
FYNAINNAFNQINPPHLVNARLTYQGPDKDWSLSLGVTNLLDSYYYAGKAENVGSFGVVS
GVVGRPREWMITAKKSF
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgtcacatatctggaagtctgcatttcgcagcaatgccgcctgcattgcgatgatggcc
gcgatggccgctggtcccgctttggcccaggacgcatccgcgccggaacaggcggccgat
cagtcgaaccagtccgccgacatcattgtcactgcccagtttcgccagcagaatttgcag
gacacgccgatcgcgatcactgcggtgtccagcgaaacccttgccgcgcgcagccagacc
agcgtcaccgaccttggccagttcgcccccaacgtggctctggccccggcaaccagcctt
cagggtaattcggtcgcggccttcatccgtggcgtaggccagctggattccagcttcgcg
ctggagccgggcgtgggcatctatatcgacgatatttattatggcacgacctatggtgcg
gtgatggacctgaccgatctggagcgggtcgaagtgctgcgcggcccgcagggaacgctg
gctggcaagaacagcgtcggcggtgcggtcaagctgttcagcaagaagcccgacgcaaca
gcgggcggcttcatcgaagcgacctatggcagctatgaccggctggaactgcgcggcagc
gccaacatcccgttgagcgatagcctgttcctgcgcgtgtcgggcgtgtcgaaaaatgtc
gacggctatatgaaactgctggactatggctgcgccaatcccgcgtcgggcatcgcgccc
accggcaccaatgacaaggggtgccaggtcggcaccgaaggcggcatcgacgtcatggcc
ctgcgcgccgcgctgcgctttgcgccggtcggctcgccgctggaagtcaacatcgttgcc
gacgtgtcgaaggataatagcgaagcggtcgcgaccaaattgctctatgccaacaacccg
ctggtgcgcagctatgtgccgggcaatcctacggccggcattccgttcgacagccgcttc
atcactgcgtcgaagagctacacctcctacgccaattatgcgaccggcggcaattacacg
accgtgttcggcatcccgacccaggtcgcacccggtggcttctccgccagcccgaccagt
tcggtcaaaagctggggcattgccgggacgatcgactatgatctgtccgacatgctcaag
ctcaaatcgatcaccggctatcgcaaggcggacggcaccagcgcgatcgacgtggatggc
tcgccgctcgccatattgctgcagcagttcaactacagccatgaacaattcacgcaggaa
ctgcgcctgagcgccaatttcaacgatgcggtcgacctgaccgtgggcggcttctattac
aaggcgaccgatcttctgtcggggcgcagcgccatcccgacgctcctgttcgattttctg
gtggatgacgtggtcaagaaccgcagtgcatcggcctttgcccatgccgaattccatgtc
accgatgcgttcaacgtgatcgcgggcctgcgctacactgacgacaagaaaacctataat
tattcgcgccggaatattgacggcagtctgcccagcggcgccttcttcacgcccaacttc
ctgctggccggtcttgacggactgtcgggcacgttcaagggcgatcgcctcgattaccgt
ctgggcgtgaattatcgctggaacgaccagttgatgacctatgcgcaggtgtcgaccggc
ttcaagggcggcggcatcaacccgcgtccttcagcccccgaccaggtgcagactttcggc
ccggaaaagctgacgacctatgaagccggtttcaaggcagacctgatgggtcggatgcta
cggttgaacggcgctgtgttcctcaatgattacaaggatatgcagctggtccgctatcag
tgcccggaaagcgtcgtattctcctgctcggtcccgtccaacgcgggcgacgcgcgcgtc
cttggctgggaactggaagcttcgcttcgtcccactgacggcctgtcgatcgatgcgtcc
gcgggttatctcgactttgactataagaagatcaccaatcccgcgacgctggtgacgaag
aatatgatcgcgccgttcatcagcaaatggcaattgtcggcgggcatccagtatgaagcg
gatctggccggatcgggcacgctgacaccgcgtatcgactggtcctggcgctccaactat
ttttacaatgccatcaacaatgccttcaatcagatcaacccgccgcatctcgtcaatgcg
cgcctgacctatcaggggccggacaaggactggtcgctcagccttggggtcaccaatctg
ctcgatagctattattatgctggcaaggcggaaaatgtcggcagcttcggcgtcgtttcc
ggcgtggtcggtcggccgcgcgaatggatgatcaccgcgaaaaagagcttctga
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