Sphingobium xenophagum: CJD35_16340
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Entry
CJD35_16340 CDS
T05146
Name
(GenBank) IclR family transcriptional regulator
KO
K13641
IclR family transcriptional regulator, acetate operon repressor
Organism
shyd
Sphingobium xenophagum
Brite
KEGG Orthology (KO) [BR:
shyd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shyd03000
]
CJD35_16340
Transcription factors [BR:
shyd03000
]
Prokaryotic type
Helix-turn-helix
IclR family
CJD35_16340
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
HTH_20
DUF742
RPA_C
Motif
Other DBs
NCBI-ProteinID:
ASY46070
UniProt:
A0A249MXG5
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Position
II:315153..315911
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AA seq
252 aa
AA seq
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MNGTTPSTVKSAMRTIDIIEYVVARPAGVVAQEIAAGLTIPVSSLSYLLATLVERQYLAR
VGRRYLPGPALARLVSPRMALSLADRVRPLVKSLRSQTNETASFFVRDGWQLEAIVTETA
EQSLRYSISVGTRIPMHSLAAGKALLATLSGDEIDAYFAQVRLEPFTPHSVTDEKALRKE
LAAIRTTGVGRTREEYTPGICGLGMAALVDGMAVGAFAVAIPLPRFTAELEARVVQKLEQ
TVGLFAAAETPA
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgaatggcaccacgccatctactgtcaaatcggcgatgcggacgatcgacatcatagaa
tatgtcgtcgcgcggccggcaggcgtggtggcgcaggagattgcggcgggccttaccatt
ccagtcagcagcctgtcctatctgctcgcaacgctggtcgagcgacagtatctggcgcgg
gtcgggcggcgctacctgcccggcccggcattggcccggctcgtgtcgccacgcatggcc
ctgtcgctggcggacagggtgcggccgctggtcaaatccttgcggtcacagaccaacgag
accgcgtctttctttgtgcgggacggttggcaactggaagccattgtcacggaaacagcg
gaacagtcgctgcgctattcgatcagcgtgggaacgcggattcccatgcacagcctggcg
gcgggcaaggcattgctggctacgctgtccggcgatgaaatcgacgcctatttcgcacaa
gtgcgattggagccgttcacgccccatagcgtgacagacgagaaggcgttgcgaaaggaa
ctggcagcgatccgcacgacgggcgttgggcgcacgcgggaggagtatacgccgggcatt
tgcggccttggtatggcggcattggtcgatggcatggcggtcggcgcctttgctgtcgcc
atccccctgccccgctttaccgcggagctggaagcccgcgtggttcaaaaactggagcag
accgtcggtcttttcgccgcggcggagacgccagcatag
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