Sphingobium xenophagum: CJD35_16515
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Entry
CJD35_16515 CDS
T05146
Name
(GenBank) ABC transporter
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
shyd
Sphingobium xenophagum
Pathway
shyd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
shyd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CJD35_16515
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shyd02000
]
CJD35_16515
Transporters [BR:
shyd02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
CJD35_16515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_16
AAA_29
AAA_22
nSTAND3
AAA_25
ATP-synt_ab
Mg_chelatase
DUF87
APS_kinase
nSTAND1
RsgA_GTPase
Sigma54_activat
AAA_24
TsaE
Motif
Other DBs
NCBI-ProteinID:
ASY46101
UniProt:
A0A249MXK0
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All DBs
Position
II:351652..353460
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AA seq
602 aa
AA seq
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MSATPHVEVKGLTVTARNGAGEIFPIVSNIDFALNRGEVLALIGESGSGKTTIALTLLGH
ARPGAKIAEGSIRVGECDLTKLDRGALAQLRGNRIAYIAQSAASAFNPSRTIMDQVVEPA
LIHNLMPRAEAEAKAVDLFRALAMPFPETIGARYPHQLSGGQLQRLMAAMALITDPELVI
LDEPTTALDVTTQIEVLRAFKTVVLERGATAIYVSHDLAVVAQMADQIVVLSQGRIREAG
AAAQILHAPADDYTRTLMAAARPAIRPAPPKIALPAAPLLEIRGMTAGYGKIGKDGRPRI
PVLRDINLTIERGATLGVIGESGSGKSTIARVIAGLLPPASGQVLLDGETLPPGLHGRSR
DQFRRVQLVFQNADTALNPAHSVGRILTRPLAFYHGLKGNAARMRVLELLDLIRLPATLI
DQPIGGLSGGQKQRINLARALAADPQLILCDEVTSALDTVVGAAILELMAELRRELGIAT
MFISHDISTVRAICDDILVLYAGTMVETGPREAFGVAPFHPYTDLLIGSVPEMRAGWLEE
SHAGIAPPPVGGQGDHPDLCRFLPRCPARVDGLCNTTPPPRRPLSKGSQILCHLGDESLR
PS
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgacgccccatgtcgaggtaaagggcctgaccgttaccgcgcgcaatggcgcg
ggcgagatattcccgatcgtcagcaacattgatttcgcgctgaatcgcggcgaagtgctg
gcgctgatcggcgagagcggatcgggcaagacgacgatcgcgctgacgctgctgggccat
gccaggcctggggcgaagatcgcggaagggtctatccgggtgggcgagtgcgaccttacc
aagctcgatcgcggcgcgctggcacaattgcgcggcaatcgcatcgcctatatcgcacaa
agcgcggcatccgccttcaatccatcgcgcaccatcatggatcaggtggtcgagcctgcg
ctgatccacaatctgatgccgcgcgcggaggccgaggccaaggcggtcgacctgttccgc
gcgctcgcaatgccctttcccgaaacgatcggcgcgcgctatccgcatcaattgtcgggc
ggacagttgcagcggttgatggccgcgatggcgctgatcacggatccggaactggtcata
ttggacgaaccgacgactgcgctggacgtgaccacccagatcgaggtgctccgcgcgttc
aagacagtagtgctggaacggggcgcaaccgccatctacgtgtcgcatgacctggccgtc
gtcgcacagatggccgaccagattgtcgtgctgagccaggggcgcatccgggaggcgggc
gcggctgcgcagatcctccacgcccccgcggatgactataccaggacactgatggccgcc
gcccggcccgctatccgcccggcacccccaaaaattgccctgcccgccgcgccgctgctg
gaaatacgcggcatgacggcgggctatggcaagatcggcaaggatggtcgtccgcgtatt
ccggtactgcgcgacatcaacctgacgatcgagcggggcgcgactttgggcgtgatcggc
gaaagcggatcgggcaaatccactatcgcgcgggtcatcgccgggctgctgccacccgcc
agcgggcaggtgctgctggatggcgaaactctgccgccaggcttgcacgggcgtagtcgc
gaccagtttcgccgggtgcaactggtgttccagaatgccgatacagcgctcaatcccgcg
cacagcgtcggccggatattgacgcgaccgctggccttttaccatgggctcaagggcaat
gcggcgcggatgcgcgtgctggagttgctcgatctgatccgcctgcccgccacgctgatc
gaccagccgatcggcggcctttcgggcggccagaagcagcggatcaacctggcacgggcg
ctggcggccgatccgcaactgatcctgtgcgacgaggtgacgtccgcgctcgatactgtc
gtgggcgcggcgatactggagctaatggccgagttgcgccgggaactgggcattgcgacc
atgttcatcagccatgacatttcaacagtccgggcgatttgcgacgacatattggtgctt
tacgccggtacgatggtcgagaccgggccgcgtgaagcgttcggcgtcgcgccgttccat
ccctatacggacctgctgatcggatcggtgccggaaatgcgggcgggatggctggaggag
agtcatgccgggatcgcgccgccgccggttggaggacagggcgatcatcctgacctttgc
cgtttcctgccgcggtgccccgcgcgggtggatgggctttgcaataccacgcccccaccc
cgccgcccgctcagcaagggcagccagatattgtgccatcttggagatgaaagcttgcgt
ccgtcatga
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