Sphingobium xenophagum: CJD35_16535
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Entry
CJD35_16535 CDS
T05146
Name
(GenBank) PAS domain S-box protein
Organism
shyd
Sphingobium xenophagum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHASE
HATPase_c
Response_reg
MASE1
HisKA
PAS_3
PAS_4
PAS_9
PAS
PAS_8
CLLAC
Hpt
Motif
Other DBs
NCBI-ProteinID:
ASY46389
UniProt:
A0A249MZ29
LinkDB
All DBs
Position
II:356359..359910
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AA seq
1183 aa
AA seq
DB search
MEQQDSRASTGSDETLRAGLFAQRIAALNAALALAYCVVGWLGLKMAIPPGYATVIWPAS
GIAVSAILVFGRTLWPGVAIGAFLVNVAIGMMRLETAGLPLILSNALCIAIGSTLQALVA
ACIVRKRFGRPIQLTSAWDVALMAALICPLACVIAPSIGVTILYLNHSIPATAIAESWAT
WWTCDLLGVLIVTPVIMLGPWKGWRILWRGEPIAHYTATMSAVMMVMIGGTLTAWKVTSE
FVHDRNQASFAVLAHENERALRYRLEAYSRSLDGAAALFAASDEITPDDWRAYVAALNMG
TFLPGLNGMGYIRPVTPATLPAFMRAQTQRFPGYRIHPDSNAPLRGVIAQIEPIATNRAA
MGLDILAEARRRSAALHARDTGKATITRRIILVQDAQKRPGFLLLRPLYQPGLPHVTVEE
RRKALVAWIYAPFIANRLMEGLTQSQGRSLDIHIFDGPVTADDDTIYASAAKGNHRPKYS
VTRTLLLMEQRWTVRWTSTPQFEQSVSTSEGWLVLLCGLAISWIFGILTLSYIRREAYAL
QQVEIKTSELMERETVLQQAVSALEESERHFSALASLSPAGIFRTDDLGFCNFANDAWLK
TTGLSPDAVMGVGWMAAIHPHDREKIRAQWRTAMSQGRTWRVELRFCHSDGGICWVDLIC
GPEVDTQGQLIGLIGVGTDITRRKDLEQENEAALVRAEQAANAKAVFLANMSHEIRTPMN
GVIGFTELLLHDEPRHAQRTKLELILESSQSMMELLNDILDFSRIEAGQMVLEPEPVNLQ
KKLQSSVAALHALAERKGLPVSVIVDPALPQMILCDRLRLRQIIVNLLANAIKFTHEGHI
IIRAIRLPDAVLRIEVEDTGIGIAHDRQTAIFREFVQAHGAAAQRHGGSGLGLAICDKLA
RLMGGQVVLRSNPGEGTIVALQIPLVAAEGEAMAPAPTMMDPPVRATIARRILLVEDHDI
NQLLVSEMLERLGHEVAIASNGAEAIAMVDDAHARGLPYALVLMDLRMPHMDGMTATRTL
RRRGYGPDRLPIIAISANAYADDITACLDAGMQGHVAKPVRMSDLQAALKPWLRVENDHR
MLTGSAPSPELARMYRQRLDNIAALFADAAAPDGLTSETKAQLRNAMHQLAGTAGLFESA
TTSSALREIYEALEAWSDEQWRDLIRGAAERFTLITGQPERAL
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atggaacaacaggacagccgggcatcgaccggtagtgacgaaactttgcgcgcgggtctt
ttcgcgcagcgcatcgcggcgctgaatgccgcgttggcgctggcctattgcgtcgtcggg
tggctgggcctgaaaatggcgatcccgcccggctatgcgacagtaatctggccggcgtcg
ggtatcgccgtgtccgctatcctggttttcggacgtacgctatggccgggcgttgcgatc
ggcgcgtttcttgtcaatgtcgcgatcggcatgatgcgactggaaacggcaggcctgccg
ctgatcctgtccaacgcgctgtgtattgcaatcggatcgaccttgcaggcattggtcgcc
gcctgcatcgtacgtaagcgcttcgggaggccaatccagttgacgtcggcatgggatgta
gcgctgatggcggcgctgatctgtccgctggcctgcgtcatcgcgcccagcatcggcgtc
accattttgtacctgaaccactccatccctgcgaccgccattgccgaaagctgggcgaca
tggtggacatgtgatctgctgggggtgttgatcgtcaccccggtcatcatgctcggtccc
tggaagggatggcgcatattgtggcgcggcgagccgatcgcgcattataccgcgacgatg
agcgcggtcatgatggtcatgatcggtggcacgttgaccgcatggaaggtcacgtccgaa
ttcgtccatgaccgcaaccaggcaagctttgccgtgctggcgcatgaaaatgagcgggca
ttgcgataccggctggaagcctattcccgcagcctggacggcgccgcggcgctatttgcc
gcgtcggacgagataaccccggacgattggcgcgcctatgtcgcggcgctgaacatgggc
acattcctgcccggtctgaacggcatgggctatatccgtcccgtgacacctgcgacgctg
cccgcgtttatgcgcgcgcagacgcagcgtttccccggctatcgcatccatcccgacagc
aacgcccccctgcgcggcgtgatcgcccagatcgaaccgatagccaccaaccgcgccgcc
atggggctggacatattggccgaagcccggcggcgatccgccgcgctgcacgcgcgcgac
accggcaaggcgacgatcacccggcgcatcatattggtgcaggatgcgcaaaagcgcccc
ggattcctgctgttgcggcctctctatcagcccggcctgccccatgtgaccgtggaggag
cgacgcaaggccctggtcgcgtggatctatgcgccgttcatcgccaaccgcctgatggag
ggcttgacgcaaagtcagggacggtcgctggacatccatattttcgatggtcctgtgacg
gccgatgatgacactatttatgccagcgctgccaaggggaaccatcgacccaaatatagc
gtaacccgcacgctgttgctgatggagcagagatggacggtgcgctggaccagcacgccc
cagtttgagcaaagcgtatcgacgagcgaaggctggctggtgctgctttgcgggctggcg
atcagctggatattcggcatattgacgctgtcctacatccggcgcgaagcctatgcgttg
cagcaggtggagatcaagaccagcgaattgatggagcgcgaaacggtgctccagcaggcg
gtgagcgcgctggaggaaagcgaacggcatttttccgcgctggccagcctgtcacctgcc
ggaattttccgcacggatgatctgggcttttgcaatttcgccaatgacgcctggctgaaa
accactggcctgtcgcccgacgcggtcatgggcgttggctggatggcggcgatccacccc
catgatcgtgagaagatacgggcgcaatggcggaccgccatgtcgcaagggcggacatgg
cgagtggaattgcgcttctgccacagcgatggcggcatttgctgggtcgacctgatctgc
ggcccggaggtcgatacgcaagggcagttgatcggcctgatcggggttggcaccgacatc
acgcggcgcaaggatctggaacaggagaatgaggcagcgctggtgcgcgctgaacaggcg
gccaatgccaaggccgttttcctggcgaatatgagccatgagatccgcacgccgatgaac
ggcgttatcggctttaccgaattgctgttgcatgatgagccgcgccatgcgcagcgcacc
aagctggagctcatcctggaatccagccagtcgatgatggaattgctgaacgacatattg
gatttttcacggatcgaggcgggacagatggtgctggaacccgaacctgtgaaccttcag
aagaagttgcagtcgagcgttgccgcactccatgcgctggccgaacgcaaggggctgccc
gtgtccgtcatcgtcgacccggccttgccgcagatgatcctgtgcgaccggttgcgattg
cgccagatcatcgtcaacctgttggccaacgcgatcaaattcacccatgaagggcatatc
atcatccgggcgatcaggctgcccgatgccgtgttgcgcatagaggtggaggataccggc
atcggcatcgcccatgaccggcagaccgcgatatttcgggaatttgtccaggcgcatggg
gcggcggcacagcgccatgggggttcgggccttggcctggcgatctgcgacaagctggcg
cggttgatgggcggacaggtcgtgctgcgcagcaatccgggcgagggcacgatcgtcgcg
cttcagataccgctggtagccgcagagggcgaagcgatggcgcccgcgcccaccatgatg
gatccaccggtcagggccaccatcgcgcgccgcatcctgctggtcgaggaccatgacatc
aatcagttgctggtgtcggagatgctggagcggctgggccatgaagtcgccattgcctcc
aacggtgccgaagcgatcgccatggtcgatgacgcccatgcgcggggtttgccctacgcg
ctggtgttgatggacctgcgcatgccgcacatggacgggatgacagcgacgcgcacgttg
cgcaggcgtggctatggtccagaccggctgccgatcatcgcgatcagcgcgaatgcctat
gcggacgatattacggcctgtctcgatgcgggcatgcagggccatgtggccaagccggtc
aggatgagcgatttgcaggcggcactgaagccgtggttgcgcgtggaaaacgaccatcgg
atgctgacaggatcggcgccgtcccccgaactggcgcgcatgtatcgccagcggctggat
aatatcgccgcactattcgccgatgccgccgcgcccgatggactgacgagcgagacaaag
gcgcagttgcgcaacgccatgcaccagttggccgggacggccggcctgtttgagagcgca
acgaccagcagcgcgctacgcgagatttatgaggcgctggaagcgtggtccgacgagcaa
tggcgagacctgattcgcggggcagccgaacgattcacgctgatcacaggccagccagaa
agggctttgtaa
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