Sphingobium xenophagum: CJD35_18765
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Entry
CJD35_18765 CDS
T05146
Symbol
groL
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
shyd
Sphingobium xenophagum
Pathway
shyd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shyd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CJD35_18765 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shyd03019
]
CJD35_18765 (groL)
03110 Chaperones and folding catalysts [BR:
shyd03110
]
CJD35_18765 (groL)
03029 Mitochondrial biogenesis [BR:
shyd03029
]
CJD35_18765 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shyd04147
]
CJD35_18765 (groL)
Enzymes [BR:
shyd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
CJD35_18765 (groL)
Messenger RNA biogenesis [BR:
shyd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CJD35_18765 (groL)
Chaperones and folding catalysts [BR:
shyd03110
]
Heat shock proteins
HSP60 / Chaperonin
CJD35_18765 (groL)
Mitochondrial biogenesis [BR:
shyd03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
CJD35_18765 (groL)
Exosome [BR:
shyd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CJD35_18765 (groL)
Exosomal proteins of other body fluids (saliva and urine)
CJD35_18765 (groL)
Exosomal proteins of breast cancer cells
CJD35_18765 (groL)
Exosomal proteins of colorectal cancer cells
CJD35_18765 (groL)
Exosomal proteins of bladder cancer cells
CJD35_18765 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Pho88
Motif
Other DBs
NCBI-ProteinID:
ASY46532
UniProt:
A0A249MZ40
LinkDB
All DBs
Position
p1:143468..145087
Genome browser
AA seq
539 aa
AA seq
DB search
MAAKEVKFASDARDRMLRGVDTLANAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKEI
ELKDKFENMGAQMLREVANKQNDKAGDGTTTATVLAQSIVREGSKAVAAGMNPMDLKRGI
DLAVTTVVEDLKAHAKKVSANSEIAQVATISANGDAEVGTILAEAMEKVGNEGVITVEEA
KSLATELETVEGMQFDRGYLSPYFVTNAEKLKVELEDPYILIHEKKLSNLQALIPLLEQV
VQSGRPLLIIAEDVEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAVLTAGSV
VSEELGTKLENVTLGMLGRAKKVIIDKDNTTVVDGAGARDEIDARVAQIRAQIETTTSDY
DREKLQERVAKLAGGVAVIRVGGATEVEVKEKKDRVDDALHATRAAVEEGILPGGGIALL
RALKALDGLKAGNDDQQSGIDIIRRALRAPVRQICDNAGEDGAFIVGKLLESDDYNWGFN
AASGQYEDLVKSGVIDPAKVVRTALQDAASVASLLITTEALVAELPKDEKAAPMPAMDY
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaaggaagtgaagttcgcctcggacgcgcgcgatcgcatgctgcgcggcgtc
gatacgctggccaacgccgtcaaggtgacgctcggtcccaagggccgcaatgtggtcatc
gagaagagcttcggcgcgccgcgtatcaccaaggacggcgtcaccgtcgccaaggaaatc
gaactgaaggacaagttcgagaatatgggcgcacagatgctgcgcgaggtcgccaacaag
cagaacgacaaggccggtgacggcacgaccaccgccaccgtgctggcccagtccatcgtg
cgcgaaggctcgaaggcggtcgcggcggggatgaaccccatggacctgaagcgcggcatc
gacctcgccgtgacgacggtcgtcgaggatctcaaggcgcatgccaagaaggtctcggcc
aacagtgagatcgcccaggtcgcgaccatctcggccaatggcgatgccgaagtcggcacc
atcctcgcagaagcgatggaaaaggtcggcaatgagggtgtcatcaccgtcgaagaggcc
aagagcctcgcgaccgagcttgagacggtcgagggcatgcagttcgaccgcggctatctc
tcgccctacttcgtgaccaacgccgagaagctgaaggtcgagctcgaggatccctacatc
ctcatccacgagaagaagctttcgaacctccaggcgctcattccgctgctcgagcaggtg
gtgcagtcgggccggccgctgctcatcatcgccgaggacgtggaaggcgaagcgctcgcc
accctcgtcgtcaacaagctgcgcggcggcctcaaggtcgcggccgtcaaggcgccgggc
tttggcgatcgccgcaaggccatgctcgaggacatcgcggttctcaccgccggcagcgtg
gtcagcgaggaactcggcaccaaactggagaatgtcacgctcggcatgctcggccgcgcc
aagaaggtcatcatcgacaaggacaacaccacggtcgtcgatggcgccggcgcgcgcgac
gagatcgacgcccgcgtggcgcagatccgggcgcagatcgagacgaccaccagcgactat
gaccgcgagaagctccaggagcgcgtggccaagcttgccggcggcgtcgccgtgatccgc
gtgggcggcgcgaccgaggtcgaggtcaaggagaagaaggaccgggtcgacgacgcgctg
cacgcgacccgcgccgctgtcgaggaaggcattctgcctggcggcggcatcgcgctgctc
cgcgcgttgaaggcgctcgacggcctcaaggcaggcaatgacgaccagcagtccggtatc
gacatcattcgccgcgccctgcgcgcgccggtgcgccagatctgcgacaatgccggtgaa
gacggcgcgttcatcgtcggcaagctgctcgaaagcgacgactataactggggcttcaat
gccgcgagcggccagtatgaggacctggtgaagtcgggggtcatcgatcccgccaaggtc
gtgcgcaccgcgctgcaggatgcggcctcggtcgcatccctgctcatcacgaccgaagcg
ctggtcgccgagctacccaaggatgagaaggccgcgcccatgccggccatggactactga
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