Sphingobium xenophagum: CJD35_18840
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Entry
CJD35_18840 CDS
T05146
Symbol
rpoH
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
shyd
Sphingobium xenophagum
Brite
KEGG Orthology (KO) [BR:
shyd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shyd03021
]
CJD35_18840 (rpoH)
Transcription machinery [BR:
shyd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CJD35_18840 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
UCR_14kD
DUF3683
Motif
Other DBs
NCBI-ProteinID:
ASY46542
UniProt:
A0A249MZ52
LinkDB
All DBs
Position
p1:complement(165120..166058)
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AA seq
312 aa
AA seq
DB search
MTDIALKNAVIPAPAGEDGLNRYLAEIRKFPILSPEDEYMLAKRFKEHGDPEAAAKLVTS
HLRLVAKAAMRYRGYGLPVADLISEGNVGLIQGVRRFDPDRGFRLATYALWWIKASIQEF
ILRSWSMVKLGTTAAQKRLFFNLRRIKNSLQAYDDTDLKPDQVRQIADTLGVSETEVTSM
NRRMMQGGDASLNVPLGETGEDQWQDLLSDDSPLQDEALAGAQERQRRQNMLFEALGTLS
DRERDILVQRRLIDEPKTLEDLSLVYKVSRERVRQIEVRAFEKLSRAMHRIDDEQRIAKL
GGHRENQAREGH
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgacagacattgcactcaagaacgccgttattccggcgccggccggtgaggatggactg
aaccggtatctggcggagatcaggaaattcccgatcctctcgcccgaagacgaatatatg
cttgccaagcgcttcaaggagcatggcgatccggaagcggccgccaagctcgtgaccagc
catcttcgcctggttgcgaaggccgcgatgcgctaccgcggctacggcctgccggttgcc
gacctcatttcggaaggcaatgtcggcctgattcagggggtccggcgattcgaccctgat
cgcggttttcgtcttgcgacttatgcgctgtggtggatcaaggcctcgatccaggaattc
atcctgcgcagctggagcatggtcaagctcggcacgacggccgcgcaaaagcgcctgttc
ttcaatcttcgccggatcaagaactccctccaggcctatgacgacaccgatctgaaacct
gatcaggtccgccagatcgccgacacgctcggggtctcggaaaccgaagtcaccagcatg
aaccggcggatgatgcagggcggcgacgcctcgctcaacgtgccgctcggggaaacgggc
gaggatcagtggcaggacctgctgagcgatgacagtccgctccaggacgaggcgcttgcc
ggcgcgcaggaacgccagcgccgccagaacatgctgttcgaggcgctcggcacgctttcc
gaccgcgagcgggatatcctggtccagcgtcgtctgatcgacgaacccaaaacgctcgag
gatctgagcctcgtctataaggtgagccgtgagcgcgtccgccagatcgaggttcgcgcc
ttcgaaaagctcagccgcgccatgcaccggatcgatgatgagcagcgcatcgcgaaactg
ggcggacatcgggagaaccaggcacgcgaaggccattga
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