Sphingobium xenophagum: CJD35_19605
Help
Entry
CJD35_19605 CDS
T05146
Symbol
gabD
Name
(GenBank) NAD-dependent succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
shyd
Sphingobium xenophagum
Pathway
shyd00250
Alanine, aspartate and glutamate metabolism
shyd00310
Lysine degradation
shyd00350
Tyrosine metabolism
shyd00650
Butanoate metabolism
shyd00760
Nicotinate and nicotinamide metabolism
shyd01100
Metabolic pathways
shyd01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
shyd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
CJD35_19605 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
CJD35_19605 (gabD)
00310 Lysine degradation
CJD35_19605 (gabD)
00350 Tyrosine metabolism
CJD35_19605 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
CJD35_19605 (gabD)
Enzymes [BR:
shyd01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
CJD35_19605 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
CJD35_19605 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
CJD35_19605 (gabD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
ASY46705
LinkDB
All DBs
Position
p2:42358..43809
Genome browser
AA seq
483 aa
AA seq
DB search
MNLSLAEPKLLRAQAFVDGAWIDGEARIDVLNPADSSLVGSVPDLGYREAEGAVDAAYRA
LTDWRKATGKQRAAILRRWYDLVLVHTDDLARLLTAEQGKPLHEAKAEVVYAASFIEWFA
EEAKRVNGDVLAPHAADHRLLVRREPVGVVGAVTPWNFPLAMITRKAAPALAAGCTMVLK
PSELTPLSALALAWLADQAGVPAGVFNIVTGQPAPIGDVLTADKRVRKFTFTGSTGVGKM
LAARCMSTVKKVSLELGGNAPFIVFDDAKLDDAVEGAIASKFRNSGQTCVCTNRILVQSG
VYEAFSRQLAARVRALAVGPGLSTGADQGPLIDERAVAKVESHIEDGVKHGARILTGGRR
VPGAGHFFEPTVLVDVSPDALLCREETFGPLAGLVRFQTEDEAINLANATDSGLAAYVYT
QSLERSWKVSEALEYGMVGLNTGLISTEVAPFGGVKESGLGREGSRYGIDEYLNLKFVCH
QIG
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcttagccttgcggagccaaaactgctccgggcgcaagcttttgtcgatggcgca
tggatcgacggcgaagcgcgaatcgacgtcttgaatccggcagacagctccttggtcggc
tcggtcccggatctcgggtatcgcgaggccgaaggtgccgtcgacgcggcctatcgtgcc
ttgaccgattggcgaaaagctacaggcaagcagcgggccgcgattttgcggcgctggtat
gatctggtgctcgtccatacggatgatctggcgcgccttctgacggccgagcaaggcaaa
ccgttgcacgaggccaaggccgaggtggtgtatgcggcatcgttcatcgaatggttcgcg
gaggaggcgaagcgtgtgaacggagatgtcttagcacctcatgcggccgaccaccgtctc
ctggtgcgacgcgaacccgtgggtgtggtaggcgctgtaacaccctggaattttccgctc
gccatgatcacccgaaaggcagcgccagctctggctgccggctgtaccatggtgctgaag
ccgtcggaattgacgccgctttcagcgctcgctttggcgtggctggccgaccaggccgga
gtgccggcgggagttttcaatatcgtgaccggtcagcccgcgccgatcggcgatgtgctg
acggctgacaagcgcgttcgcaagttcaccttcactggttcgacaggcgttggcaagatg
ctcgccgcccgttgtatgagcaccgtgaagaaggtttccctcgaattgggtggaaacgcg
ccgttcattgtctttgatgatgcgaaactcgacgatgcggttgaaggcgcaatagcatca
aagttccggaattcaggtcagacctgcgtctgcacaaatcgcattctggtccaatccggc
gtttatgaagccttttcccggcagctggcggcacgtgttcgcgcgcttgccgtcgggccg
ggtctttcgaccggcgcggatcaggggccattgatcgatgaacgtgccgttgcaaaggtc
gaaagccatatcgaagacggcgtcaaacatggtgccaggatattgaccggagggcgacga
gtgcccggggcaggccatttcttcgagccgaccgttctcgtagatgtttcgccggatgct
ctcctatgtcgggaggaaacctttggcccccttgccggcctcgtccgtttccagacagag
gatgaggcgatcaatttggcgaatgccacggacagcggcttggcggcttatgtatacacg
caatcccttgagcgcagttggaaggtgagtgaggctcttgaatatgggatggttgggctc
aacaccggcctgatttcgacggaggtcgcgcctttcggtggggtgaaggaatccggtctc
gggcgggaaggatcacgatatgggatcgatgagtatctcaatttgaaattcgtctgtcat
cagatcggttag
DBGET
integrated database retrieval system
