KEGG   Sphingobium xenophagum: CJD35_19875
Entry
CJD35_19875       CDS       T05146                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
shyd  Sphingobium xenophagum
Pathway
shyd00010  Glycolysis / Gluconeogenesis
shyd00020  Citrate cycle (TCA cycle)
shyd00260  Glycine, serine and threonine metabolism
shyd00280  Valine, leucine and isoleucine degradation
shyd00310  Lysine degradation
shyd00380  Tryptophan metabolism
shyd00620  Pyruvate metabolism
shyd00630  Glyoxylate and dicarboxylate metabolism
shyd00640  Propanoate metabolism
shyd00670  One carbon pool by folate
shyd00785  Lipoic acid metabolism
shyd01100  Metabolic pathways
shyd01110  Biosynthesis of secondary metabolites
shyd01120  Microbial metabolism in diverse environments
shyd01200  Carbon metabolism
shyd01210  2-Oxocarboxylic acid metabolism
shyd01240  Biosynthesis of cofactors
Module
shyd_M00009  Citrate cycle (TCA cycle, Krebs cycle)
shyd_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
shyd_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
shyd_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:shyd00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    CJD35_19875 (lpdA)
   00020 Citrate cycle (TCA cycle)
    CJD35_19875 (lpdA)
   00620 Pyruvate metabolism
    CJD35_19875 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    CJD35_19875 (lpdA)
   00640 Propanoate metabolism
    CJD35_19875 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    CJD35_19875 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    CJD35_19875 (lpdA)
   00310 Lysine degradation
    CJD35_19875 (lpdA)
   00380 Tryptophan metabolism
    CJD35_19875 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    CJD35_19875 (lpdA)
   00670 One carbon pool by folate
    CJD35_19875 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:shyd04147]
    CJD35_19875 (lpdA)
Enzymes [BR:shyd01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     CJD35_19875 (lpdA)
Exosome [BR:shyd04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   CJD35_19875 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 NAD_binding_8 FAD_oxidored FAD_binding_2 GIDA HI0933_like AlaDh_PNT_C Lys_Orn_oxgnase 2-Hacid_dh_C Thi4 GMC_oxred_N
Other DBs
NCBI-ProteinID: ASY46755
UniProt: A0A249MZU9
LinkDB
Position
p2:complement(91429..92826)
AA seq 465 aa
MADSYDVIVLGSGPGGYVAAIRAAQLKLNTAIVERENLGGVCLNWGCIPTKALLRSAEVF
RYMRHAKDYGLVAEKITADLDAVVKRSRGVARQLNQGVSHLMKKNGIAVYMGEGKLTGKG
RLSVTAPDGKTSELTAKNIIIATGARARDLPFPKADGKRVWTYRHAMNPPEMPNKLLVIG
SGAIGIEFASFYNDMGAEVTVVEMLDRIVPVEDADVSTFLEKALVKQGMKILTGAGVQKL
DIGATGVTVAIKARDGKLVSDEYSHVIVAIGIVPNTETVGLEALGVKTERGHIVTDGACR
TNVEGIWAIGDATAPPWLAHKASHEGVIAAETIAGQHPHAMDPRNIPGCTYCHPQIASVG
LTETNAREAGHEVRIGTFPFIGNGKAIALGEPEGFVKTVFDAQTGELLGAHMVGPEVTEM
IHGFTIGRTLETTEAELMETVFPHPTISETMHESVLAAFGRAVHI
NT seq 1398 nt   +upstreamnt  +downstreamnt
atggctgatagttacgacgtgattgtccttggctcaggccccggcggctatgtcgccgcg
atccgcgccgctcagctcaagttgaacacggcgattgtcgagcgcgagaatctaggcggt
gtctgcctcaactggggttgcatacccaccaaggcgttgctgcgctcggcggaggttttt
cgctacatgcggcatgccaaggattatggcctggtcgcggagaagataaccgccgatctg
gatgcagtggtgaagcgctcacgcggcgttgccaggcagcttaatcagggtgtctcgcac
ctgatgaagaagaacgggatcgccgtttatatgggtgaggggaagctcaccggcaaaggg
aggctttctgtcacagcgccggatggtaagaccagtgagttgaccgcgaagaatattatc
atcgccacgggcgcgcgtgctcgcgatctgccgttcccgaaagccgatggaaagcgcgtc
tggacctatcgccacgcgatgaacccgccggaaatgccgaacaagctgcttgttatcggc
tcgggcgcgatcggcatcgagttcgccagcttttacaacgacatgggcgcggaagtgaca
gtcgtcgagatgctggacaggatcgttccggtcgaggatgcagatgtctcgaccttcctg
gaaaaagcgttggtgaagcagggcatgaagatcttgacgggtgcaggtgtccaaaagctc
gatatcggtgccaccggcgtaacagtcgcgatcaaagcccgggatggcaaacttgtttcg
gacgaatacagccatgtcatcgtggcaatcgggatcgtcccaaacaccgaaaccgttggg
cttgaggcactgggtgtgaaaacggagcgtggccacattgttaccgatggcgcatgccgc
accaatgtcgagggaatctgggcgatcggagacgccacggcgccgccttggctagcgcac
aaggccagccatgaaggtgttatcgcggcagaaaccatagcgggtcagcatccgcacgca
atggaccccaggaacattcccggctgcacctattgccacccgcagatcgctagtgtcggc
ctcaccgaaacaaatgcgagggaagcaggtcacgaagtgaggattggcacctttcccttc
atcggcaatggcaaggctatcgcgctcggcgagccagaaggcttcgtcaagacggtattt
gatgcccaaactggcgagctgctgggcgcacacatggtcggcccggaggtgaccgaaatg
atccacggcttcaccatcggtcgtacactggaaacaaccgaggcggagctgatggaaacg
gtttttccgcatccgaccatttccgaaacgatgcatgaaagcgtgcttgctgccttcggg
cgcgcagtccatatttag

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