Sphingobium xenophagum: CJD35_19875
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Entry
CJD35_19875 CDS
T05146
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
shyd
Sphingobium xenophagum
Pathway
shyd00010
Glycolysis / Gluconeogenesis
shyd00020
Citrate cycle (TCA cycle)
shyd00260
Glycine, serine and threonine metabolism
shyd00280
Valine, leucine and isoleucine degradation
shyd00310
Lysine degradation
shyd00380
Tryptophan metabolism
shyd00620
Pyruvate metabolism
shyd00630
Glyoxylate and dicarboxylate metabolism
shyd00640
Propanoate metabolism
shyd00670
One carbon pool by folate
shyd00785
Lipoic acid metabolism
shyd01100
Metabolic pathways
shyd01110
Biosynthesis of secondary metabolites
shyd01120
Microbial metabolism in diverse environments
shyd01200
Carbon metabolism
shyd01210
2-Oxocarboxylic acid metabolism
shyd01240
Biosynthesis of cofactors
Module
shyd_M00009
Citrate cycle (TCA cycle, Krebs cycle)
shyd_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
shyd_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
shyd_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
shyd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
CJD35_19875 (lpdA)
00020 Citrate cycle (TCA cycle)
CJD35_19875 (lpdA)
00620 Pyruvate metabolism
CJD35_19875 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
CJD35_19875 (lpdA)
00640 Propanoate metabolism
CJD35_19875 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CJD35_19875 (lpdA)
00280 Valine, leucine and isoleucine degradation
CJD35_19875 (lpdA)
00310 Lysine degradation
CJD35_19875 (lpdA)
00380 Tryptophan metabolism
CJD35_19875 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
CJD35_19875 (lpdA)
00670 One carbon pool by folate
CJD35_19875 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shyd04147
]
CJD35_19875 (lpdA)
Enzymes [BR:
shyd01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
CJD35_19875 (lpdA)
Exosome [BR:
shyd04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
CJD35_19875 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
NAD_binding_8
FAD_oxidored
FAD_binding_2
GIDA
HI0933_like
AlaDh_PNT_C
Lys_Orn_oxgnase
2-Hacid_dh_C
Thi4
GMC_oxred_N
Motif
Other DBs
NCBI-ProteinID:
ASY46755
UniProt:
A0A249MZU9
LinkDB
All DBs
Position
p2:complement(91429..92826)
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AA seq
465 aa
AA seq
DB search
MADSYDVIVLGSGPGGYVAAIRAAQLKLNTAIVERENLGGVCLNWGCIPTKALLRSAEVF
RYMRHAKDYGLVAEKITADLDAVVKRSRGVARQLNQGVSHLMKKNGIAVYMGEGKLTGKG
RLSVTAPDGKTSELTAKNIIIATGARARDLPFPKADGKRVWTYRHAMNPPEMPNKLLVIG
SGAIGIEFASFYNDMGAEVTVVEMLDRIVPVEDADVSTFLEKALVKQGMKILTGAGVQKL
DIGATGVTVAIKARDGKLVSDEYSHVIVAIGIVPNTETVGLEALGVKTERGHIVTDGACR
TNVEGIWAIGDATAPPWLAHKASHEGVIAAETIAGQHPHAMDPRNIPGCTYCHPQIASVG
LTETNAREAGHEVRIGTFPFIGNGKAIALGEPEGFVKTVFDAQTGELLGAHMVGPEVTEM
IHGFTIGRTLETTEAELMETVFPHPTISETMHESVLAAFGRAVHI
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggctgatagttacgacgtgattgtccttggctcaggccccggcggctatgtcgccgcg
atccgcgccgctcagctcaagttgaacacggcgattgtcgagcgcgagaatctaggcggt
gtctgcctcaactggggttgcatacccaccaaggcgttgctgcgctcggcggaggttttt
cgctacatgcggcatgccaaggattatggcctggtcgcggagaagataaccgccgatctg
gatgcagtggtgaagcgctcacgcggcgttgccaggcagcttaatcagggtgtctcgcac
ctgatgaagaagaacgggatcgccgtttatatgggtgaggggaagctcaccggcaaaggg
aggctttctgtcacagcgccggatggtaagaccagtgagttgaccgcgaagaatattatc
atcgccacgggcgcgcgtgctcgcgatctgccgttcccgaaagccgatggaaagcgcgtc
tggacctatcgccacgcgatgaacccgccggaaatgccgaacaagctgcttgttatcggc
tcgggcgcgatcggcatcgagttcgccagcttttacaacgacatgggcgcggaagtgaca
gtcgtcgagatgctggacaggatcgttccggtcgaggatgcagatgtctcgaccttcctg
gaaaaagcgttggtgaagcagggcatgaagatcttgacgggtgcaggtgtccaaaagctc
gatatcggtgccaccggcgtaacagtcgcgatcaaagcccgggatggcaaacttgtttcg
gacgaatacagccatgtcatcgtggcaatcgggatcgtcccaaacaccgaaaccgttggg
cttgaggcactgggtgtgaaaacggagcgtggccacattgttaccgatggcgcatgccgc
accaatgtcgagggaatctgggcgatcggagacgccacggcgccgccttggctagcgcac
aaggccagccatgaaggtgttatcgcggcagaaaccatagcgggtcagcatccgcacgca
atggaccccaggaacattcccggctgcacctattgccacccgcagatcgctagtgtcggc
ctcaccgaaacaaatgcgagggaagcaggtcacgaagtgaggattggcacctttcccttc
atcggcaatggcaaggctatcgcgctcggcgagccagaaggcttcgtcaagacggtattt
gatgcccaaactggcgagctgctgggcgcacacatggtcggcccggaggtgaccgaaatg
atccacggcttcaccatcggtcgtacactggaaacaaccgaggcggagctgatggaaacg
gtttttccgcatccgaccatttccgaaacgatgcatgaaagcgtgcttgctgccttcggg
cgcgcagtccatatttag
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