KEGG   Sphingobium xenophagum: CJD35_20210
Entry
CJD35_20210       CDS       T05146                                 
Name
(GenBank) DUF87 domain-containing protein
  KO
K06915  DNA double-strand break repair helicase HerA and related ATPase
Organism
shyd  Sphingobium xenophagum
Brite
KEGG Orthology (KO) [BR:shyd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:shyd03400]
    CJD35_20210
DNA repair and recombination proteins [BR:shyd03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Archaeal homologous recombinant proteins
     CJD35_20210
SSDB
Motif
Pfam: DUF87 FtsK_SpoIIIE AAA_16 AAA_22 Zeta_toxin AAA_33
Other DBs
NCBI-ProteinID: ASY46815
UniProt: A0A249N009
LinkDB
Position
p2:complement(146921..148132)
AA seq 403 aa
MATVVQIDPSADQWSVPIGRHSRGSLMLNLERLLAGRLLIQGSSGAGKSRTLRKIIEEAF
DFTTIVLVDPEGEFGNLAAHIGATSLKGCELTSDGLTAAAARARQHRLSLHVDLTDLDPD
QRIIKAAALFAGLIGAPREYWAHTVLVCIDEGHLLAPHHAGSARDAETRRLGVATLTDLC
ARGRKRGIAPVIATQRLAKLSSSVISELQNFLVGLNVFDRDIARAADLLGFSAKEADALR
KLAPGEFFAMGPAMSPLPVLAHMEETITEHLGATPRLTAAAAVDSEEAEKLLDLSALREV
SNGSRDAALTLKGTRALDAFLLDPSAPHAASIIGALKSIAPNATTANDLAGHIGAPREAV
DNALDMLAAISAVDTMPRGEDRIARLHARLRAKISDIPVVALA
NT seq 1212 nt   +upstreamnt  +downstreamnt
atggcaacagtcgtacagatcgacccctccgccgaccaatggtccgtgccgatcggcagg
cacagccgtggctcgctcatgctgaacctcgaacgcctgctcgccgggcggctgctcatc
cagggcagcagcggcgcgggcaagagcagaaccctgcgcaagattatcgaggaggccttc
gatttcacgacaatcgtgctcgtcgatcccgaaggcgaattcggcaatctcgccgcccac
atcggcgcaacctccctaaagggctgcgagctgacctccgatggcctgacggcagccgcg
gcccgcgccaggcagcaccgcctgtcgcttcacgtcgacctcaccgatctcgatcccgac
cagcggatcatcaaggcggcggcgctcttcgccggactgatcggcgcgccgcgcgagtac
tgggcgcataccgtcctggtctgcatcgacgagggccatctgctcgcgccacatcatgcc
ggatcggcccgcgatgccgagacccggcgccttggcgttgccacgctgaccgacctctgt
gcccgcggccgcaagcgcggcatcgccccggtcatcgccacgcagcgcctcgccaagctc
tcatcctcggtgatctcggagctgcagaacttcctcgttggcctcaacgtgttcgatcgc
gacatcgcgcgcgcggccgatctcctcggtttctcggcgaaggaggccgatgccctgcga
aagctcgcgcccggtgagttcttcgcgatgggcccagcgatgtcgccgctgcctgtcctc
gcccatatggaagagacgatcaccgagcatctcggcgcgacgccaaggctcaccgcggcc
gctgcggtcgacagtgaagaagcggagaagctgctcgacctgtcggctctccgcgaggtc
tcgaacggctcgcgcgatgcggctctgacgctcaagggcacccgggcgctcgatgccttc
ctcctcgatccttccgcgccgcacgcggcctcgatcatcggcgcgctcaagagcatcgcg
ccgaacgccacgaccgccaacgatcttgcgggccatatcggtgccccgcgcgaagccgtc
gacaacgccctcgacatgctcgccgccatctccgcggtggacacgatgcctcgaggcgag
gatcgcatcgcccggcttcatgcccgcctccgcgccaagatcagcgacatccccgtggtg
gcgctggcatga

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