Sphingobium xenophagum: CJD35_20780
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Entry
CJD35_20780 CDS
T05146
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
shyd
Sphingobium xenophagum
Brite
KEGG Orthology (KO) [BR:
shyd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shyd02000
]
CJD35_20780
Transporters [BR:
shyd02000
]
Other transporters
Pores ion channels [TC:
1
]
CJD35_20780
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ASY47050
UniProt:
A0A249N0B4
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All DBs
Position
p3:complement(23525..25660)
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AA seq
711 aa
AA seq
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MAAGAGATEPGSAASEPQAPPSSGGNDGSDIVVTALRRSVSVQDIPASITAVSGDTLLSR
GVTDTIALANVIPGLVFVPNFGNTIVTIRGVGSTSVAGSSEPTVAIYSDGAYLPRPFMGT
LRAVDLDRVEVLRGPQGTLYGRNATGGAVNFISASPTKTWTGRIDAIVGGRNQVGISGFV
SGPLSDGVQIRLSGGREKQDGPVENILRPLNVVERNGGGTDAKYGRVALRLTPTSSLTVD
LSLRYDEDNAAKIDQSPVGPISLGVEGVDWTNEPWKTISNRPHSAVNKLLIGQAGVTWEA
SDAITVKSLTNYILGKMRTANEGDGTAFPYLYTAIWPRRSESISQEFNLFGNFDKFNFIL
GAFYYHEEYKSLLDYIFENPDPAAVLTQNLGQQAKVDNFAAYFDATYSFTDALRLNVGMR
LNYDKNEYESISGLEPLIPTVAVAGGTIKKTKLLPKVALQYDFTPEIQSYIQWSRGYKGG
GGNLPASDGSAPAFGPETLDSYELGVKSRLLNGKLTANFAAFYYDYSGLQVEKSVPPNSV
LMDNAQAKAYGAELEIRYSPVPDLTFTLAPTYVHTEFTEFTSTELLTLVPYDLAGKTLNF
APKWTVNASASKRFDLGGELLNELELTASARHNSTVVFSYFNLDALDRQRPYTVVDLNAT
ISDVDRKTTLSLFVNNLGNKAYKTVTGNFGFGYIGHWGAPRTWGARLSRSF
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
gtggctgcgggtgccggcgcaaccgagcccgggtcggccgcgtcagagcctcaggccccg
ccgtcgagtggcggcaatgacggctccgacatcgtcgtgaccgcgctgaggcgcagcgtc
agcgttcaggatattcccgcttcgatcaccgccgtgagtggcgacacccttctcagccgg
ggcgtcactgataccatagccctggccaatgtgattcctggattggtgttcgtccccaac
ttcggcaacaccattgtgactatccgcggcgtcggctcgacctctgtggctggttcgtcc
gaaccgacggtcgcgatctattcggatggcgcctatttgccccggcctttcatgggaacc
ctgcgcgcggtcgacctcgatcgcgtcgaagtcctgcgcgggccgcaagggactctctat
ggccgcaatgctacgggcggtgcggtcaacttcatctccgctagcccaaccaagacgtgg
acggggcgcatcgacgctattgtaggaggccgcaatcaggtcggtataagcgggtttgtc
tcagggccactctccgatggcgtgcagatcaggctcagcggcggacgtgagaagcaggat
ggcccggtcgaaaacatcctcaggccccttaacgtggtggagcgtaatggcggcggaacg
gacgccaaatatggccgtgtcgcgctgcgcctgacacctacgtctagcctgacggtggac
ctgtcgctccgctatgatgaggacaatgcggccaagatcgaccagagcccggttgggccg
atcagcctcggggtcgaaggggtggattggacgaatgagccttggaagacgatctcgaat
cgcccgcacagtgcggtaaacaagctgctcatcggccaggcaggcgtgacgtgggaggcg
tccgatgcgatcaccgtcaagtctctgacgaactatatccttgggaagatgcggaccgcc
aacgaaggcgatggcaccgcatttccctacttatatacggcgatttggccgcgtcgatcc
gaatcgataagccaggagttcaacctgttcggaaatttcgataaatttaatttcatcctc
ggggccttctattaccacgaggaatataagagtcttctagattacatcttcgagaatccg
gatccggcggcggtcctgacgcaaaatcttggccagcaagccaaagtggacaattttgcg
gcatacttcgacgcgacctattcgttcacggacgccttgaggctgaatgtgggtatgcgc
ctcaattacgacaagaatgagtatgagtcgatttcgggccttgaacccctcatccctacg
gtagcagtcgcgggcggcaccatcaaaaaaaccaagttgctcccaaaggttgcccttcaa
tatgatttcacgccagaaatccagagctacatccagtggagccgcggctacaagggcggc
ggcggcaacctgccggcaagcgatggctccgcgccggcttttggaccggagacgctcgat
tcctacgagcttggcgtgaagtcccgcctgctcaacggcaaactgactgctaacttcgcg
gccttctactatgactattcgggcctgcaggtcgaaaagtcggttcccccgaacagcgtc
ctcatggacaatgcgcaagcgaaggcgtatggcgccgaacttgagatccgatacagccca
gtccccgacctcaccttcacccttgcgcccacatacgtgcacacggagttcacggagttc
acctcgacggagctgctgacgctcgtcccctacgatctcgctggaaagacgttgaatttc
gcgccgaagtggaccgttaacgcgagtgcatccaagcgtttcgatcttggcggagaactg
ttgaacgagctagaactcaccgcaagtgcgcggcacaattcgaccgtcgtcttctcctac
ttcaacctcgacgcccttgaccgacaacggccttacaccgtggttgacctaaacgcgacg
atctccgatgtggacaggaaaaccacgctgtcgctgttcgtcaacaatttgggcaacaag
gcatacaagactgttacgggtaatttcgggtttggatatatcggtcactggggtgccccc
aggacgtggggcgcgcgcctcagccgctccttctga
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