KEGG   Sphingobium xenophagum: CJD35_20880
Entry
CJD35_20880       CDS       T05146                                 
Name
(GenBank) VirB4 family type IV secretion/conjugal transfer ATPase
  KO
K03199  type IV secretion system protein VirB4 [EC:7.4.2.8]
Organism
shyd  Sphingobium xenophagum
Pathway
shyd03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:shyd00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    CJD35_20880
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:shyd02044]
    CJD35_20880
Enzymes [BR:shyd01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     CJD35_20880
Secretion system [BR:shyd02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   CJD35_20880
SSDB
Motif
Pfam: CagE_TrbE_VirB P-loop_TraG AAA_10 AAA_22 FtsK_SpoIIIE AAA_7 AAA_16 TrwB_AAD_bind ATPase_2
Other DBs
NCBI-ProteinID: ASY46936
UniProt: A0A249N059
LinkDB
Position
p3:complement(46133..48517)
AA seq 794 aa
MVFGKSALAEKVPFDKAKREEMPEKFLPYSRHVNEHVVALDNGDLMLMLELDGRPFETSD
VRDLNDWHTRLNGVWRNIHDERLSIWTHMLRMRVRDYPGGTFRSHFAAKLDQKYYERMTA
ERMFRNRFFMTVVIRPTANATDKLMDFLRKKQEDKNANIAEALELLEDKVRDLEKLLLRV
RPRRVGIYEHRGLLFSEPLEILNQVMTGRYRRCPLVRGRLGSALYASRAIIGAETFEVRD
ADHSMFGGIFGIREYPSSTTPRQFESLLSVDFSLAITQSFTFLSRTAATERFRLRQTQMA
NAGDKAISQMDELIDAADDLQSNRFVLGDHHFTLTVFAEDLKKLRDNMSIARAALADTGM
VAARESAALEAAYWSQLVGNFAWRARPAPITSYNFSAFSPFHTFPAGHEDGNHWGPAVAL
LKTSARSPYYFNFHSADLGHSMVIGPSGGGKTVLVNFLMAQLEKFNARHIFIDKDQGAEI
FVRASGGTYLALRNGEPTGFAPLKALDNTASHRAFLGRFIRQLVKQEGAPITVQESHLID
DGIEAVMKLPREQRSLSALRTMLGMSDSGGVGARLVKWTSEGNLGWVFDNEEDSMSLEAR
FVGFDMTDFLENAEIRTPVMLYLFERIDALLTGERMVIAIDEFWKALADPAFTAFAQDGL
KTYRKRNAFLVFATQSPADALRSTISHSILEQVATKIFLPNPFGQRRDYIEGFSLSEAEF
KLVREELSPESRKFLVKQGHDSVVVGLDLIGMDDELAVLSGRAETTGVAREVIAELGNDP
KLWLPEFHRRRRPS
NT seq 2385 nt   +upstreamnt  +downstreamnt
gtggtgttcggtaagagcgcgctcgcggagaaggtgccttttgacaaggccaaacgggag
gaaatgcccgagaaattcttgccgtattcgcggcatgtcaatgagcatgtggtcgccctc
gataacggcgatctgatgctcatgctcgaactggatggacggccctttgagacttcggac
gtgcgcgatctgaatgattggcacacgcgcctcaacggggtctggcgcaatatccatgac
gagcggctttcgatctggacgcacatgttgcggatgcgcgtgcgcgactatccaggcggc
acgttccgctcgcatttcgccgcgaagctcgatcaaaaatactatgagcggatgacggcc
gaacgcatgttccgcaaccgcttcttcatgacggtcgtgatccgcccaacagcaaacgcg
accgacaagctgatggatttcctgcgcaagaagcaggaggacaagaacgccaatatcgcg
gaagctctagagctgctggaagacaaggtgcgcgatctggaaaagctactgctgcgcgtt
cgtccgcgccgtgtcggcatctatgagcaccggggtctcctgttctccgaaccgctggaa
atattgaaccaggtgatgaccgggcgctatcggcgctgtcctctggtccgtggccgtctc
ggctcggcgctctatgcgagccgcgccatcatcggcgctgagacatttgaggtccgcgac
gccgatcattcgatgttcggcggcattttcggcattcgcgagtatccgtcatcgacaacg
ccgcgccagtttgaatcgctgctttcggtcgatttcagcctcgccataacgcagtcgttc
acgttcctgtcgcgcacagcggcaacagaacggtttcggcttcgccagacccaaatggcg
aacgccggtgacaaggcgatcagccagatggatgagctgatcgacgcggccgacgatttg
caatcgaaccgctttgtgctgggggaccatcatttcacgctgacggtgttcgcggaagat
ttgaagaagctgcgcgataacatgtcgatcgcgcgcgcggcgctggccgatacgggcatg
gtcgccgcccgcgaaagcgcggcgctggaagctgcctattggtcgcagctggtcggcaac
ttcgcgtggagggcgcgccccgcgccgatcacgtcatataatttctcggcgttctcgccc
ttccatacgttccctgcagggcacgaggacggcaatcattgggggcctgcggtcgccttg
ctcaagacaagcgctcgcagcccctattacttcaatttccattcggcagacctgggccat
tcgatggtcattggtccatcgggcggcggtaagacggtgctggtcaacttcctgatggcg
cagctcgaaaagttcaacgcgcgccatatcttcatcgacaaggatcaaggcgcggaaatt
tttgtccgagccagcggcggcacctatctcgcgctgcgcaacggggaacctacgggcttc
gctccgctcaaggcgctcgacaatacggcttcccatcgcgcgttcctcggtcgcttcatc
cgccagctggtgaagcaagagggggcgccgatcacggtgcaggaatcgcacctgatcgac
gatggcatcgaagccgtgatgaagctgccacgcgagcaacgctcgctgtcggcgctgcgg
accatgctcggcatgtcggactcgggcggcgtcggcgcgcgcctagtcaagtggacctcc
gaggggaaccttggctgggttttcgataatgaggaagattccatgtctctcgaagcccgt
ttcgtgggcttcgatatgaccgacttcctcgaaaacgcggaaatccgcacgccggtcatg
ctctacctgttcgagcggatagacgcgctcctgacaggcgagcgcatggttattgcgatt
gacgaattttggaaggcgctggccgatccggcgttcacggcattcgcgcaggatggcctc
aagacataccgcaagcgcaatgcgttcctcgtctttgcaacacagtcgcctgcggacgcg
ctgcggtccacgatcagccattcgatcttggagcaggtcgcgacgaaaatcttcctgccc
aatccgttcggccagcgccgggattacatcgaaggcttctcgctctcggaggcggaattt
aagctggtgcgcgaagagctgtcgccggaaagccgcaaattcctcgtgaagcagggccat
gactccgttgtggtcggcctggatctcattggcatggacgatgaactggccgtgctgtcg
ggccgcgctgaaacaacgggcgtggcccgcgaagtgattgccgaactgggcaatgatccg
aagctctggttgccggaatttcaccggcgccggcgcccaagctga

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