KEGG   Sphingobium xenophagum: CJD35_20890
Entry
CJD35_20890       CDS       T05146                                 
Name
(GenBank) hypothetical protein
  KO
K03197  type IV secretion system protein VirB2
Organism
shyd  Sphingobium xenophagum
Pathway
shyd02024  Quorum sensing
shyd03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:shyd00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    CJD35_20890
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CJD35_20890
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:shyd02044]
    CJD35_20890
Secretion system [BR:shyd02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   CJD35_20890
SSDB
Motif
Pfam: TrbC DUF3040
Other DBs
NCBI-ProteinID: ASY46938
UniProt: A0A249N040
LinkDB
Position
p3:complement(48855..49196)
AA seq 113 aa
MFRIWKIKAESRLDALLARLKPSPLMARALPLSLLASLLVAEPAFAQANFEGLADNILGL
LSNGLLRTLAIIAIIVVGLLWFLGRASVQMLVTVVVGVVIVFSAPWIVDTITG
NT seq 342 nt   +upstreamnt  +downstreamnt
atgtttcgtatctggaagatcaaggctgaatcccggctcgatgcgctgctcgcgcgtctc
aagccctcgccgctcatggcgcgcgcgctgcccctgtcgctgctggcaagcctgctcgta
gcggagccggcttttgcgcaggcaaactttgaaggcctggccgacaacattctcggcctg
ctgagcaacggtttgctccgcacgcttgcgatcatcgcgatcatcgtcgttggccttctg
tggttcctcggccgcgcgtcggtgcagatgctcgtcacggtcgtagttggcgtggtgatc
gtgttctccgcgccttggatcgtcgacacgattacggggtga

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