Sphingobium xenophagum: CJD35_21190
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Entry
CJD35_21190 CDS
T05146
Name
(GenBank) PAS domain-containing sensor histidine kinase
KO
K14986
two-component system, LuxR family, sensor kinase FixL [EC:
2.7.13.3
]
Organism
shyd
Sphingobium xenophagum
Pathway
shyd02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
shyd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CJD35_21190
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
shyd01001
]
CJD35_21190
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
shyd02022
]
CJD35_21190
Enzymes [BR:
shyd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
CJD35_21190
Protein kinases [BR:
shyd01001
]
Histidine kinases
LuxR family [OT]
CJD35_21190
Two-component system [BR:
shyd02022
]
LuxR family
FixL-FixJ (nitrogen fixation)
CJD35_21190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
PAS
PAS_8
PAS_9
HisKA
PAS_4
Diguanyl_cycl_sensor
HATPase_c_3
DUF4118
Motif
Other DBs
NCBI-ProteinID:
ASY46985
UniProt:
A0A249N0H4
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All DBs
Position
p3:complement(91889..93391)
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AA seq
500 aa
AA seq
DB search
MARSDGASRLLPRLALPAALGVALLAIAGGLAVRLLFADQLGARATFIFFVPGVVAASAL
SGLRVGAMASLAGAAAGLWCDHLTGPIEEGSVIAAVAFVAIGLAIALGGEWFQRARLASD
EAAAGLASREAHLRSILDTVPDAMVVIDAAGLIRDFSPAAERMFGWKAQDIAGRNVRLLM
PEPYRAAHDGYLDRYYQTGERRIIGKGRVVVGERRDGSTFPLELAVGEVQANGQRFFTGF
VRDLTERQHAEARLQELQSELVHVSRLTALGEMASALAHELNQPLSAIANYLKGSKMLLE
RDEGRNDRVIDAVGRAAAEALRAGEIIRRLRDFVARGETERAVESLPKLVEEASALALVG
AKEHGIRVQHDFSPEIDLVLADKVQIQQVVLNLVRNAIDAMAGNGSGPRALTIAIAPADA
DMARVTVADTGPGIAADVADRLFQPFITTKRTGMGVGLSISRTIVEAHGGRIWAESHEGG
GAVFGFTLPKEDKEGPGDGE
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
gtggctcgcagcgatggtgcaagccggctcctgccgcggctcgccctgcccgctgccctg
ggcgtcgcgctgctcgcgatcgccggcggcctcgcggtgcggctgctgtttgccgatcag
ctcggcgcacgcgcgaccttcatcttcttcgtcccgggcgtggtcgccgccagcgccctg
tcaggccttcgcgtcggcgcgatggcttcgctggccggcgcagccgccggcctgtggtgc
gaccacctgacaggcccgatcgaggaaggcagcgtgattgccgcggtggccttcgtggcg
atcgggctcgccatcgcgctagggggcgagtggtttcagcgagcccgacttgcttcggac
gaggccgctgccggcctcgccagccgagaagcccatctgcgctcgatcctcgacaccgtc
cccgacgccatggtggtgatcgatgctgcgggactcattcgcgacttcagccccgcggcg
gaacggatgttcggctggaaggcgcaggacatcgcgggccgcaacgtgcggctcctgatg
cccgagccctaccgcgcagcccatgatggctatctggatcgctactaccagacgggagag
cgccgcatcatcggcaagggccgcgtcgtcgtaggcgaacgtcgcgacggatcgaccttt
ccgctcgaactcgccgtcggcgaagtgcaggccaacgggcagcggttcttcaccggcttc
gtccgcgatctcaccgagcgccagcatgccgaggcgaggctgcaggaactgcagagcgaa
ctcgttcacgtctcgcggctgaccgccctgggtgaaatggcctcggccctcgcccatgaa
ctgaaccagcccctctccgccatcgccaactatctcaagggcagcaagatgctgctcgaa
cgcgatgagggtcgcaacgaccgggttattgatgcggtcggccgcgccgccgccgaggcg
ctgcgagccggggaaatcatccgccggctgcgcgatttcgtcgcgcgcggcgaaaccgaa
cgagcggtcgaaagcctgccgaagcttgtcgaggaggcgagcgcgctggcgctcgtcggc
gccaaggagcatgggatacgcgtccagcatgacttcagcccagagatcgatctcgtgctc
gcggacaaggtgcaaatccagcaggtggtgctcaacctcgttcgcaatgccatcgacgcc
atggccgggaatgggtcggggccacgtgcgttgaccatcgccatcgcgccggccgacgcc
gacatggcgcgggtgacggtcgccgataccggcccgggcatcgcggccgatgtggccgac
cggctgtttcaaccattcatcaccacgaaacgcaccggcatgggtgtaggcctgtcgatc
tcgcgcacgatcgtcgaggcccatggcgggcgcatctgggcagaatctcatgaagggggc
ggggccgtgttcggcttcacgctgcccaaggaggacaaggaagggccaggcgatggcgag
tga
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