KEGG   Sphingobium xenophagum: CJD35_21865
Entry
CJD35_21865       CDS       T05146                                 
Name
(GenBank) transporter
  KO
K03199  type IV secretion system protein VirB4 [EC:7.4.2.8]
Organism
shyd  Sphingobium xenophagum
Pathway
shyd03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:shyd00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    CJD35_21865
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:shyd02044]
    CJD35_21865
Enzymes [BR:shyd01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     CJD35_21865
Secretion system [BR:shyd02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   CJD35_21865
SSDB
Motif
Pfam: CagE_TrbE_VirB P-loop_TraG AAA_10 TrwB_AAD_bind AAA_22 AAA_7 FtsK_SpoIIIE AAA_16 ResIII ATPase AAA_23 nSTAND3 T2SSE
Other DBs
NCBI-ProteinID: ASY47108
UniProt: A0A249N0J5
LinkDB
Position
p4:51064..53454
AA seq 796 aa
MARTNRLSEQVPMKVALKEVMPTKFLPYARHVTDEVVVLDSGAIMLTFELQGRAFETADV
RDLNDWHAKLNGMLRNLHDDRLSIWTHLVRARVEQYPGGNFRSRFARDLDAAYFARMNKE
RLFINRFFVTLALRPSVHGADKLVQLFKNKARAEAEADAIDADLLEALEDKARDFEKLMD
RCSPRRLSIYGHNGLKFSETMEVAEMVMTGRHRRVPIIRGHLGSALYRQRVVFGGETVEV
RDADRSAFGGIFGIREYPASTTPTQFQSLLAVDFAFVLTQSFTFLGRAAASERFRLRQKQ
MENADDRAVSQMLDLVDAADDLMSNRFVLGDHHFTLAVYSDSLKGLRDNMSIARAALADT
GMVAAREGAALEAAYWSQLVGNFAWRARPAPITSLNFAAFSPFHTYPAGLATGNHWGDAI
ALMKTSARSPYFFSFHKRDIGHTLIVGPTGGGKTVIVNFLMAQAEKTGARQIFVDKDRGA
QIFVLASGGTYLTLENGKPTGFAPLKALENKPEDRAWLSLWVRQLVRAESRPITVQEERM
IDEGIAAVMRLPREDRSLDALRTMLGMADAGGIGARLEKWTSRGSMGWVFDNAADEMTLD
ARFIGFDMTDFLDNADVRTPLMLYLFHRIDKLLTGERTIIAVDEFWKALGDDAFRSFAQD
GLKTYRKRNAMMVFATQSPADALKSDIAHSILEQVATQVMLPNPKGARRDYVDGFSLTDA
EYQLIREELSPESRKFLVKQGHDSVVVELDLTGLDNELSVLSGRAETTPIAVQAAAEFGP
DPANWLPVFHQRRRPS
NT seq 2391 nt   +upstreamnt  +downstreamnt
atggctaggaccaatcgtctgtcggaacaggtgccgatgaaggtcgcgctcaaggaagtg
atgccgaccaagttcctgccctatgcgcggcacgtcaccgatgaggtggtggtgctcgat
tccggggcgatcatgctgacgttcgagctccagggccgagcgttcgagacggctgacgtg
cgcgatctgaatgactggcacgcgaagctcaatgggatgctgcgaaacctgcatgacgat
cgcttgtcgatctggacgcacctcgtccgcgctcgggttgagcaatatcccggcggcaat
ttccggtcccgcttcgcgcgggatctcgatgccgcttacttcgcgcggatgaacaaggag
cggttgttcatcaaccgcttcttcgtaacgctggcgttgcgcccatcggtccacggtgcc
gacaagctggtgcagctcttcaagaacaaggcgagggccgaagccgaagccgatgcgatc
gacgccgacctactggaggcgctggaggacaaggcgcgcgatttcgagaagctgatggat
cgctgctcgccgcgccggctctcgatctacggacataatggcctcaagttttctgagacg
atggaagtcgcggaaatggtgatgacgggacggcatcgccgggttccgatcatccggggg
cacctcggcagcgcgctctatcgtcaacgcgtcgtcttcggcggcgagacggtggaggtg
cgcgatgccgatcgaagcgcttttggcggcatcttcggcattagggaatacccggcgtcc
accacccccacgcaatttcaatctctgctggcggtcgatttcgcgttcgtgctgacgcaa
tccttcaccttcctcggccgtgcagcggcatcagagcgttttcggctgcggcaaaagcag
atggagaacgccgatgatcgggccgtcagccagatgctcgatcttgtcgacgcggcggac
gatctcatgtccaaccgctttgtcctgggcgatcaccacttcacgctcgcggtctattcc
gacagcctcaagggcctgcgcgacaacatgtcgatcgcccgtgcagcgctggccgatacc
ggcatggtcgcggcacgggaaggggcggcgctggaagccgcttactggagccagctcgtc
ggaaatttcgcatggcgcgcgaggccggcgccgatcacgtcgctgaacttcgcggcgttc
tcgcccttccatacctatcccgctggcctcgccacggggaaccattggggggacgcgatc
gcgctgatgaagacgagcgcacgcagcccctacttcttcagctttcacaagcgcgacatt
ggccacacgctgatcgttggcccgaccgggggcggcaagacggtcatcgtcaatttcctg
atggcgcaggccgagaaaacgggcgcgcgtcagattttcgtcgacaaggaccgcggtgcg
cagattttcgtgctggcttcgggtggcacctatctgacgctcgagaacggcaagcccacc
ggcttcgcgccgctcaaggcgctcgagaacaagccggaggatcgcgcctggctgtcgctg
tgggtgcgccagctcgttcgcgccgaaagtcgcccgatcaccgttcaggaagagcggatg
atcgatgaagggatcgccgcagtgatgcggcttccgcgagaggatcgttcgctcgatgcg
ctgcgcacgatgctcggcatggcggacgcaggcggtattggcgctcggctcgagaagtgg
acctcgcgcgggtcgatggggtgggtgttcgataacgcggcggacgaaatgacgctcgat
gcccgattcatcgggttcgacatgacggacttcctcgacaacgccgacgtccgcacgccg
ctgatgctctacctgttccaccgcatcgacaagctgctgaccggcgagcgcacgatcatc
gccgtcgacgagttctggaaggcacttggcgacgatgcgttccggagcttcgcgcaggat
ggcttgaagacataccggaagcgcaacgcgatgatggtgtttgccacgcagtcgccggcg
gacgcgctcaagagcgatattgcccactcgatcctcgaacaggtcgcgacccaggtgatg
cttcccaatccaaagggtgcgcgtcgcgactatgttgacgggttctccctcaccgacgcg
gaatatcagctcatccgcgaggagttgtcgccggaatcgcgcaaattcctcgtgaagcag
ggtcatgacagcgttgtggtcgagctggatctgacgggcctcgataacgagctgtcggtg
ctgtcgggacgcgccgaaacaacaccgatcgccgtgcaggccgcagccgaatttggcccc
gatcccgccaattggctccccgtattccaccaacgtcgtcgtccaagctga

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