KEGG   Sphingobium xenophagum: CJD35_22150
Entry
CJD35_22150       CDS       T05146                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
shyd  Sphingobium xenophagum
Pathway
shyd00521  Streptomycin biosynthesis
shyd00523  Polyketide sugar unit biosynthesis
shyd00525  Acarbose and validamycin biosynthesis
shyd00541  Biosynthesis of various nucleotide sugars
shyd01100  Metabolic pathways
shyd01110  Biosynthesis of secondary metabolites
shyd01250  Biosynthesis of nucleotide sugars
Module
shyd_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:shyd00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    CJD35_22150 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    CJD35_22150 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    CJD35_22150 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    CJD35_22150 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    CJD35_22150 (rfbB)
Enzymes [BR:shyd01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     CJD35_22150 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase 3Beta_HSD RmlD_sub_bind Polysacc_synt_2 NAD_binding_4 adh_short KR NAD_binding_8 Sacchrp_dh_NADP
Other DBs
NCBI-ProteinID: ASY47168
UniProt: A0A249N0P6
LinkDB
Position
p5:20461..21516
AA seq 351 aa
MRVIVTGGAGFIGSALVRYLVLQKGYDVLTIDALTYAGCEASLKEVEGKNSHQFLHANIC
DRAAMDAAITGFQPDRIMHLAAESHVDRSITGAADFIQTNVVGSFTLLEAARAYWNGLEG
AAKDAFRFLHVSTDEVYGSLGDEGLFEETTPYDPSSPYSASKAASDHLAKAWHRTYGMPI
VVSNCSNNYGPYHFPEKLIPLTILNALEGRKLPVYGKGENIRDWLYVDDHARALDIIVEK
GEPGETYNVGGRNERKNIDVVKRICAVLDELRPTDKPRVDLIEYVTDRPGHDARYAIDAT
KLENELGWRAQENFDSGIEKTVRWYLDNEWWWRPLRDAYDGQRLGLEKAKA
NT seq 1056 nt   +upstreamnt  +downstreamnt
atgcgtgtcatcgtcaccggcggcgccggctttatcggctctgccctcgtccgttatctg
gtgctgcaaaagggctatgacgtcctcaccatcgacgcgctgacctatgcgggatgcgaa
gcgtcgctcaaggaagtggaaggcaagaacagccaccagttcctgcacgccaatatctgc
gatcgcgcggcaatggacgcagcgatcaccgggttccagcccgaccgcatcatgcatctc
gccgccgaaagccatgtcgatcgttcgatcaccggtgcggccgatttcatccagaccaat
gtcgtgggcagcttcaccctgctggaggccgcccgcgcctactggaacggcctcgaaggc
gccgcgaaagacgccttccgcttcctccatgtgtcgaccgacgaagtctatggctcgctg
ggcgacgaagggctgttcgaggaaacgacgccctacgatccctcctcgccctattcggcg
tcgaaggctgcgtccgatcacctcgccaaggcgtggcaccgcacctatgggatgccgatc
gtggtgtcgaactgctcgaacaattacgggccgtaccactttcccgaaaagctcattccg
ctcaccatcctcaacgcgctcgaagggcgcaagctgccggtctatggcaagggcgagaat
atccgcgactggctctatgtggacgatcatgcccgcgcgctcgacatcatcgtcgaaaag
ggcgagccgggcgaaacctataatgtcggcggccgcaacgagcgcaagaatatcgatgtg
gtcaagcgcatctgcgcggtactcgacgaactgcgccccacggataagccccgtgtcgat
ctcattgaatatgtgaccgatcgccccggccatgacgcccgctacgcaattgacgcgacc
aagctggagaatgaactgggctggcgcgcgcaggagaatttcgacagcggcatcgaaaag
acggtgcgctggtatctcgacaatgaatggtggtggcgcccgctgcgcgacgcctatgac
ggccagcgcctaggtcttgagaaagcgaaggcgtga

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