Candidatus Sulfidibacterium hydrothermale: LA303_00550
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Entry
LA303_00550 CDS
T07944
Symbol
trpS
Name
(GenBank) tryptophan--tRNA ligase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
shyr
Candidatus Sulfidibacterium hydrothermale
Pathway
shyr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
shyr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LA303_00550 (trpS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
shyr01007
]
LA303_00550 (trpS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shyr03016
]
LA303_00550 (trpS)
Enzymes [BR:
shyr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
LA303_00550 (trpS)
Amino acid related enzymes [BR:
shyr01007
]
Aminoacyl-tRNA synthetase
Class I (G)
LA303_00550 (trpS)
Transfer RNA biogenesis [BR:
shyr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
LA303_00550 (trpS)
Prokaryotic type
LA303_00550 (trpS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
Zn_finger_prot
Motif
Other DBs
NCBI-ProteinID:
UBM62485
LinkDB
All DBs
Position
134839..135846
Genome browser
AA seq
335 aa
AA seq
DB search
MEKKEIVLSGIRPTGHLHLGNYFGAVKNFVKMQETNECYFFIADYHSLTTHPHPDNLQGN
VRQVLIEYLAAGLDPEKATLYLQSDIPETAELYLFLNMNAYLGELERVTTFKEKARKQPN
NVNAGLLTYPTLMAADIIIQKAHKVPVGKDQEQNLEMTRTYARRFNHMYGVDFFPIPTAY
NFGEELVKIPGLDGSGKMGKSEGEGNAIFLYEDPKSIRKKIMKAVTDSGPTEMNQPKPEP
IQNLFTLLKVVSKPDVVEYFEEKYNNCTIRYGDLKKQLAEDVIAFTAPFAERIKELSADN
EYILKVMDQGAEKARAHALETMREVRRIIGFRKIY
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagaaagaaattgtactgagcggtattcgccctaccggccatctgcaccttggg
aactattttggtgcggtgaagaattttgtgaaaatgcaggaaaccaatgaatgttatttt
ttcattgctgattatcattcactcaccacgcatccgcatccggacaacctgcaaggaaat
gttcgtcaggttttgattgaatatcttgccgccggtcttgacccggaaaaagcgacactt
tatctgcaaagcgacattccggaaactgctgaattgtatcttttcctgaatatgaatgct
tacctcggcgaactggaacgggtcaccactttcaaggaaaaagcccggaaacagcccaat
aatgtcaatgccggcttgcttacctatcctacactgatggctgcagacattatcattcaa
aaagcccacaaagtacccgtgggaaaggaccaggaacaaaacctggaaatgacccggact
tacgcccggcggttcaatcacatgtatggcgtagattttttcccgattcctacagcctat
aatttcggagaagaactggtaaaaattcccgggctggacggttccggtaaaatggggaaa
tcggaaggcgaaggcaacgctatttttctgtatgaagatccgaaatccattcgcaaaaaa
atcatgaaagccgttaccgatagtggtccgacagaaatgaaccagcccaaacccgaaccc
atacaaaacctttttaccctgttgaaagtggtttcaaagccggatgtagtggaatatttt
gaagaaaaatataacaattgcacgattcgttacggcgacctgaaaaaacagttggcagaa
gatgtcattgcgttcaccgctccttttgctgaaagaatcaaagaactttctgctgataat
gagtatatcctgaaagtaatggaccaaggagctgaaaaagcccgcgctcacgcactggaa
accatgcgggaagtccggagaattatcggattccggaaaatttactaa
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