Candidatus Sulfidibacterium hydrothermale: LA303_02190
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Entry
LA303_02190 CDS
T07944
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
shyr
Candidatus Sulfidibacterium hydrothermale
Brite
KEGG Orthology (KO) [BR:
shyr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
shyr01011
]
LA303_02190
Enzymes [BR:
shyr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
LA303_02190
Peptidoglycan biosynthesis and degradation proteins [BR:
shyr01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
LA303_02190
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
DUF1529
OAD_gamma
Motif
Other DBs
NCBI-ProteinID:
UBM62799
LinkDB
All DBs
Position
569459..571354
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AA seq
631 aa
AA seq
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MKKDIFIIVAILFFTTGTFSAKGQIFKHKKKKKSKQTEQQQDTVAATTAADTVFAFSPAQ
DTVAVTADTLMNEDSLEKDLPSFQDSIFLPRTLGALNRINDSIHRTREFHGHTLISDSPL
VQALDSLAYVKFYRKGFLMMDTVLMKKSKFKPGQIPEYPDSVYAKRIAALNAETPIELVY
NKQVKAFIHLYADKRRKLTEKVLGLSELYFPMIEQVLDQFNLPLELKYLAVVESALNPAA
GSNKGAKGLWQFMYGTGKVYGLKVTSLVDDRYDPYKSTIAACEHLKDLYAIYGNWSLVLA
AYNSGAGNVNRAIRRAGGTKNYWAIWPFLPRETRGYVPAFIAVNYIMHYAPQHNLYPMRP
GIFYFDIDTVTVHDALSFDQLHEMLGIPLDELKFLNPEYKLGIIPAVNGKTYTLRLPRQF
ADDFLNNEKALYAFKTKKGLEHDKMLAEIKKAGNRNVVIVRYGDNLGSIARRNHVYVSQL
MRWNGLHSTRIYPGQRLVVYGAGSRQFYQKTASPIARSSKKVVHVVRRGENLGLIAKKYR
CTPTDLKEWNNLKSSRIYPGQKLYVYKPAEKSKTTVRSGKYIYHIVKPGDTLWDIAKEYD
GVTVEQIKRLNHIRNSHHLRPGQRIKIASVS
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagatatttttattattgttgccatcctgttttttactacaggaactttcagt
gcaaagggacaaatttttaaacataaaaagaaaaaaaagtcgaaacaaaccgaacagcag
caggataccgtagcggcgacaactgctgcagatactgtatttgcattttctcctgctcag
gatacagtggcggttaccgcagataccctcatgaatgaagatagcctggaaaaagatttg
ccttcgtttcaggattctatctttttaccccgtacccttggtgctttaaaccggataaac
gacagtattcatcgtacccgggaatttcacggtcatacactgatcagcgattcccctctt
gtacaggctttggacagtctggcctatgttaaattttaccgtaaaggtttcctgatgatg
gatacggtactgatgaaaaagtcgaaatttaaacccgggcaaattccggaatatcccgat
tcggtttatgccaaaagaattgctgcactgaatgccgaaacccccattgagctggtatat
aacaaacaggtgaaagcgttcattcatttgtatgccgataagcggagaaaactgacagaa
aaagtgctgggtctctcggagctttattttcccatgatcgaacaggttttggatcagttt
aatttaccgttggagttaaaatatcttgccgtagtggaatcggctttgaatccggctgcc
ggatccaataaaggggcaaaaggtttatggcagtttatgtacggaaccggaaaagtctat
ggcttaaaagtgacttcgctggtggatgaccgttacgatccgtataaatcaaccattgca
gcctgtgaacatttaaaagatctttatgccatttatggaaactggtcgttagtactggcg
gcttacaattcgggagccggtaatgtaaaccgggctatccggagagctggcggcaccaaa
aattactgggctatctggcctttcctgccgagagaaacccgcggatatgtacccgctttt
attgcggtaaattacattatgcattatgctccgcaacacaatctttaccctatgcggccg
ggtatcttttattttgatattgatactgtgacggtgcatgatgcgctttcgtttgaccag
ctgcacgagatgctgggaataccgttagatgaacttaaatttcttaatccggaatataag
ctgggaattattccggcagtgaatggaaaaacgtatactttgcggttgcctcgccagttt
gccgatgattttctgaataatgaaaaagcgttgtatgcctttaaaaccaaaaagggattg
gagcatgacaaaatgttggccgaaataaaaaaagccggaaaccggaatgtggtgattgta
cgttatggtgataatctgggaagtattgcccgccggaatcatgtgtacgtcagtcagctg
atgcggtggaacggattgcatagtacccggatttatccgggccagcgattggttgtttac
ggtgccggaagccggcagttttatcaaaaaacagcttctcctatagcccgttcgtctaaa
aaagttgtacatgtggtccggcgtggagaaaacctgggactgattgccaaaaaataccgt
tgtactccaacagacctgaaagagtggaataatctgaaatcttcacgaatttatccggga
cagaagttatatgtttacaagccggcagaaaaatcaaaaaccactgttcggtcaggaaaa
tatatttatcacattgtaaaacccggcgatacgttgtgggacattgccaaagaatatgac
ggagttacggtagaacaaatcaagcgcttgaatcatattcgtaactctcatcatttacgg
cccggacaaagaataaaaattgcgtcggttagctaa
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