Candidatus Sulfidibacterium hydrothermale: LA303_02385
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Entry
LA303_02385 CDS
T07944
Name
(GenBank) integration host factor subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
shyr
Candidatus Sulfidibacterium hydrothermale
Brite
KEGG Orthology (KO) [BR:
shyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shyr03032
]
LA303_02385
03036 Chromosome and associated proteins [BR:
shyr03036
]
LA303_02385
03400 DNA repair and recombination proteins [BR:
shyr03400
]
LA303_02385
DNA replication proteins [BR:
shyr03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LA303_02385
Chromosome and associated proteins [BR:
shyr03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LA303_02385
DNA repair and recombination proteins [BR:
shyr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LA303_02385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_2
PqqD
FliG_N
DUF4777
Motif
Other DBs
NCBI-ProteinID:
UBM62838
LinkDB
All DBs
Position
614937..615221
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AA seq
94 aa
AA seq
DB search
MTKAEIVAEIANKTGIEKVAVQAVVESFMESLKETMINGENVYLRGFGSFIIKERAEKTG
RNISKNTTIVIPAHKIPAFKPAKSFVNAVKENVK
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagcagaaattgtagcagaaattgctaacaaaacaggaattgagaaagtagcc
gtacaggctgttgtggaatcgttcatggaaagcctgaaagaaaccatgatcaatggtgaa
aatgtttacctgagaggctttggaagctttattattaaagaaagagcagaaaaaaccggc
cgtaatatttcaaaaaacacgacaattgttattcccgctcataagattccggcttttaaa
ccagccaaatcttttgtaaatgcggttaaagaaaacgtaaaataa
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