Candidatus Sulfidibacterium hydrothermale: LA303_02590
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Entry
LA303_02590 CDS
T07944
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
shyr
Candidatus Sulfidibacterium hydrothermale
Pathway
shyr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
shyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LA303_02590 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shyr03400
]
LA303_02590 (xseA)
Enzymes [BR:
shyr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
LA303_02590 (xseA)
DNA repair and recombination proteins [BR:
shyr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
LA303_02590 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
UBM62876
LinkDB
All DBs
Position
662681..664060
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AA seq
459 aa
AA seq
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MPETENNRKIYSLLELSKSISRMIQHTYPDAYWIKAEIAKLNYYPQSGHCYPDLVEKQQG
VVKAQIRANLWAGNYGRINQKFVEVTGEPLKDGQKILFLAKINFHERYGLALNILDVEPS
FTLGEMAREKQLTIEKLKRENLLDENKKRTLPLLPKRLAVISVETSKGYSDFRNILENNA
EGYRFQLTLFPALLQGDGAVQSIRSQLNAIADRSHQFDAVVIIRGGGGDVGLNAYDHYLL
AKAVAQCPLPVITGIGHSTNLTVVQMVAYANKITPTEAAHFFLRRFQDFENRVDEAAEKL
IRFSQNKLKTEKQAFLQMAGMFENQTRNLFQYYETHWNYVLKNFEQQSVQFLSRQQNHFY
RVISSLKYAPIQQTQFEKEKLLNVQKLLQIYVQQRFRREKDRVDHVESKVDLMKPENILK
KGYSISTMNGKLLQSVKQVEKGREMITRLFDGEIKSIIK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgccggaaacagaaaataaccgtaagatttacagcctgctggagctttctaaaagcatt
agccggatgatacagcatacctatccggatgcatattggattaaagccgaaattgccaag
ttgaattattatccccaaagcggccattgttatcccgatttggtggaaaagcagcaagga
gtggttaaagcccagattcgtgcgaacctgtgggccggaaattatggccggatcaatcaa
aagtttgtggaggtgacgggtgaaccgttaaaagacggacaaaaaatcttgttcctggca
aaaatcaattttcatgaacgttatggcttggcgttgaacatcctggatgtggagccatct
tttactctgggcgaaatggcccgcgaaaaacagctcaccattgaaaagctgaaaagagaa
aacctcttggatgaaaacaaaaaacggactttgccattgttgcctaaacggctagccgtt
atttctgtggaaacgagcaagggatacagcgatttccggaatattttggaaaataatgcg
gaaggttatcggtttcagctgacattatttccggctttgttacaaggtgatggtgcagta
caatccattcgttcgcagctgaacgccattgctgaccgctctcatcagtttgatgccgta
gttattatccggggtggaggtggtgatgtgggattgaatgcctacgatcattatcttctt
gctaaagccgtggcacagtgccctttgcctgtaattaccggaataggtcattctaccaac
ctgaccgttgtgcagatggtggcctatgccaacaaaattacacctaccgaagcggctcat
ttttttctccggcgatttcaggattttgaaaatcgtgtagatgaggctgcagaaaagctg
atacggttttcacaaaataaattgaagactgaaaaacaggcttttcttcaaatggctggt
atgtttgaaaatcaaacccggaatctttttcaatattatgaaacacactggaattatgtg
ttgaaaaattttgaacagcaaagcgtacagtttctttcccggcaacaaaatcatttttat
cgtgttatttcatctttaaaatatgctccgatacaacagacacaatttgaaaaagaaaag
ctgttgaatgtgcaaaagttgttgcaaatatatgttcagcagcgatttaggcgggaaaaa
gaccgtgttgaccacgtggagagcaaggttgacctgatgaagccggaaaatatcctaaaa
aaagggtacagtatttccactatgaatggaaaacttttacaatcggtaaagcaggtagaa
aaaggccgggaaatgattacccgtctgttcgacggtgaaataaaaagtattatcaaataa
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