Candidatus Sulfidibacterium hydrothermale: LA303_02970
Help
Entry
LA303_02970 CDS
T07944
Name
(GenBank) T9SS type A sorting domain-containing protein
Organism
shyr
Candidatus Sulfidibacterium hydrothermale
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CarboxypepD_reg
CarbopepD_reg_2
SpaA
bMG3
Por_Secre_tail
Motif
Other DBs
NCBI-ProteinID:
UBM62949
LinkDB
All DBs
Position
complement(763532..765778)
Genome browser
AA seq
748 aa
AA seq
DB search
MKPVRKLLLFVVRLALLCSVMLSFAFSPAVSSLSALPDDDEYANAEDTVTGYGYIATADE
LTKQILAHVVLSLSPDSVSGVPADTVWKLETNEAGTAFFSLPVKISSADAISLFPVLNAR
VFPHSGSGFNFISPVIVHAKILVFNANGLLVTVEEITGRHAFVNLRNQSNGLYVYRVVGD
KGVVSSGKFIKTNGVVKNVRGEVPDNAFKSADFGFKSTASEVAYYWLKWRKEGYKTDSVR
LSLHEGDNGTQTIAMEPLPLDTLWATGNFKAVDENNMGLEDVILYFKPDSVFNHTPDTTF
KMETKADGSISFKVPVWISNISKQDPINAKYQLKWSEDGYKTDSAAFTLTEGDNGTQTIK
LTPLPVDTTWGQVFIGIRNKETGESITDITELEITPDSIADKTPDTTYHIKTNESGFIYD
NFPVRISNKLPPSEIRAKYKIKWVKDGFFTDSTEVTLKDGKNDPVFVYLQPLPPGKVTLI
DTVRDLETKKPLENIITNIIVADTVFATDTTDENGVFTFKNIPQGTALTLNIHGSTSHYS
LLSVSGYKTPSDVPLNTTDTIFGVYNAYLIARNPITSATHIRQFCGENTNQDTIPFSFDN
DTNLSTYVTESDREQYRAWFKQFEKDTDSAFIFKESETSVKGKEGIFIYNGSYATDAYQG
EYSTPLGKVYPVIYAISSQFISEYSVFVHEDLRGLGYREVGRTNSVMNTNASVFTDEDKT
LIKIGREYYKQFYDGKTNIDLDFISDDE
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgaaacccgtccgtaaacttttgctctttgttgtccgtttggctctcctttgcagtgtg
atgctttcctttgcgttttcccctgctgtttcttcgctttctgctttgcctgatgatgat
gaatatgccaatgcggaagatacggtaaccggttacggatatattgctactgccgatgaa
ttaaccaaacaaatccttgctcatgttgtcttgtccctttctccggattctgtctccggg
gtgcctgccgataccgtctggaaactggaaaccaatgaggccggtaccgctttcttttcc
ctgccggtgaaaatctcttccgctgatgcaataagccttttcccggtgcttaatgctcgg
gttttccctcattcgggcagcggatttaattttatctctccggtgattgtccatgctaaa
attctggtgtttaatgccaatggtctgctggtgaccgtggaagaaattacaggacgtcat
gcttttgttaacctgaggaaccaaagtaacggtttgtatgtttaccgggtggtgggtgat
aaaggggtggtgtcttccggtaagtttatcaaaacaaatggggttgtaaagaatgtgcgt
ggtgaggtgccggataatgcttttaaatctgctgatttcggctttaaaagtacggcttcc
gaagtggcttattattggttgaagtggcgtaaggaggggtataaaacggacagtgttcgc
ctgagtcttcatgaaggcgataacggaacgcagaccattgcgatggaacctttgccgttg
gatacgctttgggctacgggtaactttaaagcggttgatgaaaacaacatgggtttagaa
gatgttattctatactttaaaccggatagtgtgttcaaccacacccccgacaccacattc
aagatggaaaccaaggcggatggaagcatcagtttcaaagttccggtctggattagtaac
atctctaaacaagatcctataaacgctaagtatcaattaaaatggagtgaagacggttac
aagacggatagtgcagcattcacgctcacagaaggcgacaacggaacacaaacaataaaa
ctaacacccttaccagtagacaccacctggggacaagtttttattggaattagaaacaaa
gaaaccggagaatcgattacagatattacagaattagaaattaccccagatagtattgca
gataaaactccagatacaacttatcacattaaaacaaatgaaagcggatttatttatgat
aacttcccagttagaatcagtaacaagttgccgccttcggaaatcagggcaaaatacaag
ataaaatgggttaaggatggttttttcacggacagcacagaagtaacgctaaaagacgga
aaaaacgatccagtctttgtttacttacaacctttaccaccaggtaaagtaacgctgata
gacacggtaagagatttagaaaccaagaaacctttggaaaacatcataacgaacattata
gtagcagacacagtattcgccacagacaccacagacgaaaacggagtattcacatttaaa
aacatcccacaaggaacagcattaactctcaacatccacggatccacaagccactactca
ttactaagcgtaagcggttacaaaacaccaagtgacgttcctttaaacacaacagatact
atcttcggagtttacaacgcttacttgattgcaagaaacccaataaccagcgccacacac
atcaggcaattctgcggagaaaacaccaaccaagacacaataccttttagtttcgacaac
gatactaacctatcaacatatgttactgaatccgacagagaacaatacagggcttggttc
aaacaattcgaaaaagacactgacagtgcattcatattcaaagaaagcgaaaccagtgtc
aaaggaaaagaaggaattttcatctacaacggctcctacgccacagacgcttatcaagga
gaatactctaccccattaggaaaagtatatcctgtaatatatgcaataagcagtcaattc
atctcagaatacagtgtttttgttcacgaagatctaagaggacttggatacagagaagtt
ggtcggactaatagtgtaatgaatacgaatgcgtctgtatttacagatgaggacaaaaca
ctaatcaagatagggcgagaatactataaacaattttatgacggaaaaacaaatattgac
cttgatttcatctctgatgacgaatag
DBGET
integrated database retrieval system
