Candidatus Sulfidibacterium hydrothermale: LA303_03000
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Entry
LA303_03000 CDS
T07944
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
shyr
Candidatus Sulfidibacterium hydrothermale
Brite
KEGG Orthology (KO) [BR:
shyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shyr03009
]
LA303_03000 (rimO)
Enzymes [BR:
shyr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
LA303_03000 (rimO)
Ribosome biogenesis [BR:
shyr03009
]
Prokaryotic type
ribosomal protein modification factors
LA303_03000 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
UBM62955
LinkDB
All DBs
Position
771068..772390
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AA seq
440 aa
AA seq
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MVRKKKKQIVNVVTLGCSKNLVDSEVLMRQLDGRYEVVNDSNDPSDIMVINTCGFIADAK
EESVDMILSAVEAKKAGELKKVIVTGCLSQRYKKELENEIDQVDAFFGVNDLPQILQTLE
ADYKKELLGERHLTTPSHYAYLKVSEGCDRHCSFCAIPLIRGQHVSKPFEEILEEAENLA
GRGVKELLLIAQDLTYYGLDLYKKRRIAGLVEKLSEIKGIEWIRLHYAYPAGFPEDLLDI
MRQNPKVCNYLDIPLQHINNRILQSMKRGLDEEKTRKLAYSWREKVPGMALRSTFIVGYP
GETEAEFQQLLDFVKEMRFDRLGVFQYSPEEDTAAFLLPDDVPAKVKQEREDRLMELQQQ
IALELNEEKVGKTFRVLIDKKEGDFYVGRTEFDSPEVDNEVLIPVGDAPLQIGDFYPVKI
ERADFYDLYGTVEPGPQDLK
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggtaagaaaaaagaaaaagcagatagtgaatgtggttacactgggatgctcaaaaaac
ctggtggattcggaagtgcttatgcggcaattggacggccggtatgaggtggttaacgat
tccaatgatccgtctgacatcatggtgattaacacctgtggctttattgcagatgccaaa
gaagaatcggttgacatgattttgtcggctgtggaagctaaaaaagccggcgaactgaaa
aaagttatcgttaccggatgtctttcgcagcgctataaaaaagaactggaaaacgagatt
gaccaggtggatgctttttttggtgtgaacgacctgccgcagatcttacaaacgctggaa
gcagattataaaaaagagctgttgggtgaacggcatctgaccacaccgtcgcattatgct
tatttaaaagtttcggaaggatgtgaccggcattgttctttttgcgccattccgctgatc
cgcgggcaacatgtttccaagccttttgaagagatactggaagaagcagagaatctggct
ggtcgcggcgtaaaagagctgctgctcattgcccaggatttgacgtattacggactggat
ttatacaaaaaacgccggattgccgggttggtggaaaaactttcggaaataaaaggcata
gagtggatccggttgcattacgcgtatccggccggatttcctgaagacttgctggatata
atgcgtcaaaatccgaaagtttgcaattatctggatatcccgttgcagcatatcaacaat
cggattttacagtcgatgaagcgcggactggatgaagaaaaaacccggaagctggcttat
tcgtggcgagaaaaagtgccgggcatggccttgcgttccacatttattgtgggatatccg
ggcgaaacggaagccgaatttcagcagttgttggattttgtaaaagagatgcggtttgac
cgtttgggggtttttcagtattctccggaagaagacacggctgcatttctcttaccggac
gatgtccctgccaaggtgaaacaagaacgggaagaccgcctgatggaattgcaacagcaa
attgcactggaactgaatgaagaaaaagtcggaaaaacgtttcgggtacttattgataaa
aaagaaggcgatttttatgtggggcgtaccgagtttgattccccggaagtggataatgaa
gtgttgatccctgttggtgatgctccgctgcaaattggcgatttttatccggtgaaaatt
gagcgggctgatttttacgatttgtatggtacagtagaaccgggtccacaagatttgaaa
taa
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