Candidatus Sulfidibacterium hydrothermale: LA303_03230
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Entry
LA303_03230 CDS
T07944
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
shyr
Candidatus Sulfidibacterium hydrothermale
Brite
KEGG Orthology (KO) [BR:
shyr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shyr02000
]
LA303_03230
Transporters [BR:
shyr02000
]
Other transporters
Pores ion channels [TC:
1
]
LA303_03230
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
DUF748
HmuY
Motif
Other DBs
NCBI-ProteinID:
UBM62998
LinkDB
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Position
828415..830124
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AA seq
569 aa
AA seq
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MNSKFLLSMITALLLAGQSFLLQAQTIKVPVKEKVINETNSRANKNVDKAIDKSFDKIEK
GIGGLFKKKKKKGKNNHSEISTASAATSGGHSASSTVANSTNPRFQGLNGNAIANLNNEI
VNRPVYLTNHSGVVAGKGSVFIYKTSEGNYGKLEIIDIDKNDNYKTTFRYVTYANDGSIV
SQSDHFSIRGTYTCDLDNGTEEGTPEKAADFQLGREDNMNTRFDSYNGAAIALYKGNGNG
TAGTKGPDVKWAKYDFVPGQTVIFEDGPAKDEENGEFPSRWDLYKGSAEIGEVNGEIVIM
FLTGGTYIVPYLKNSKEDYLPDVFTLEMDVWFSKSHTTANRVWVYLGDRKNQGNGSSSNT
NLIIMPHSLGFQNSEKYYPGTENIGWSVEQTGSWRHIAIAYTKGKFKAYMNDTRLINVPH
LEVNPTGITIESGNDDIFIKNIRIAKGGVKYYDRVLSDGKIVENGIRFDVNKATLKPESM
GPINKIYKLMVKYPDLRFSVEGHTDSDGDAALNQTLSEKRAKTVMDKLVAMGISSDRLKS
KGWGESKPIDNNATPEGKANNRRVEFVKF
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtaaatttctcctttcgatgattacggctttattattggccggccaaagtttt
ttgttgcaggcgcaaaccattaaagtccctgtaaaagaaaaagtaataaatgagacaaat
tccagagccaataaaaatgtggataaagccatagataaaagctttgataaaatagaaaaa
ggtattggcgggctttttaaaaagaaaaagaaaaaaggtaaaaataaccactcggaaatt
tcaacagcctctgccgcaacttcaggcggtcattcggcaagttctacggtggctaatagc
acaaatccacggtttcagggattgaatgggaatgctattgccaatcttaataatgaaatc
gtaaaccggcctgtttatttgacaaaccatagtggcgttgtggccggaaaaggcagtgtg
ttcatttacaaaacatccgaagggaattatggtaaattggagattatcgatattgataaa
aatgacaattacaaaacaacttttcggtatgttacctacgccaatgatggaagtatagta
agtcagtcggatcatttttctatcagaggcacctatacctgcgatctggataacggaacc
gaagaaggaacgcctgaaaaagcagctgattttcagctcggcagagaagataatatgaat
acccgcttcgatagttacaatggagcagccatcgctttgtataaaggtaacggaaatggc
accgcaggaactaaagggcctgatgtaaagtgggcaaaatatgattttgttccgggacaa
acggtcatttttgaagacggtccggcaaaagatgaagaaaacggcgagtttcccagccgg
tgggatttgtataaaggcagtgccgagattggtgaagtgaacggcgaaattgtgattatg
tttttaactggcggtacttatatcgtcccttacctgaaaaattcaaaggaagattatttg
cccgacgtattcacattggaaatggatgtttggttcagtaaaagccatactacggccaac
cgggtttgggtgtatcttggtgacagaaaaaaccagggaaacgggagtagttccaatacc
aatttaattattatgccgcacagccttggttttcagaattctgagaaatactatccgggt
accgaaaatatcggatggtcggtagaacaaacgggctcctggcgtcatattgccattgct
tataccaaagggaaatttaaagcctacatgaacgatacgcgtctgatcaatgtgccgcac
ctggaagtgaatcctaccggaattactattgaatcgggaaatgatgacatctttattaaa
aatatccggattgccaaagggggtgtaaaatattacgaccgggtgctgtctgatggaaaa
atcgtggaaaatggcatccggttcgatgtaaacaaagctaccctgaaacccgaaagtatg
gggccgatcaacaagatctataagctgatggtcaaatatcccgatttgagatttagtgtg
gaaggccataccgacagcgacggtgatgcggctttgaatcaaaccctttccgaaaaacgt
gccaaaacggtgatggacaagctcgttgccatgggcatttcttctgaccggttgaaatca
aaaggctggggcgaaagcaaaccgattgataacaatgctacccccgaaggaaaagccaat
aatcgccgggtagaatttgtgaaattttaa
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