Candidatus Sulfidibacterium hydrothermale: LA303_04360
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Entry
LA303_04360 CDS
T07944
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
shyr
Candidatus Sulfidibacterium hydrothermale
Pathway
shyr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LA303_04360 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shyr03400
]
LA303_04360 (priA)
Enzymes [BR:
shyr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LA303_04360 (priA)
DNA repair and recombination proteins [BR:
shyr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LA303_04360 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
PriA_CRR
Helicase_C
nSTAND3
AAA_30
AAA_16
TsaE
RecA
TrmB
zinc-ribbons_6
Motif
Other DBs
NCBI-ProteinID:
UBM63209
LinkDB
All DBs
Position
1115918..1118407
Genome browser
AA seq
829 aa
AA seq
DB search
MERVTLFVDVLLPLPLPGTFTYRVPFALNDAVQAGQRVSVQFGPRKVYAGLIVKIHQQPP
QKGIPKYILSVLDSRPVVNDFQLRFWQWIAGYYMSTLGEVMAAALPSAFKLSSESKVVLS
PDFVPDTETLSEPEYRLTEALLQKKKLTVHEVSRIVGYQKVLPLLKTMIERRLIMMEEEL
VQQYKPKKTKMIKLSEAFLDERALQQLMDQLSKRAHKQLELLMGFLTLSGFPLKKDFSVS
KSDLLHKTQASENALKALTDKGVFVQEEVVISRFTGENNETEKTFSLSAEQQKAFHSLKE
QMQEHRVVLLHGVTSSGKTELYIKLMEEALAEGKQVLYLLPEIALTTQIINRLRKHFGDE
VGVYHSRYNQNERAEVWENVAGIQSAEVHKPYRIILGPRSAMFLPFDRLGLVIVDEEHDS
SYKQFDPAPRYNARDAVIYLAGLHDARVVLGSATPAVETYFNAQNGKYGLVELSERFGGV
KMPEIIVVNMKEEKRRRMLKSHFSSVLLHHIQAALDDKKQVILFQNRRGFSTRIECEQCN
WVPECKYCDVTMTYHKKSQLLKCHYCGYSRPVPAVCEHCGSPNLVMQGFGTEKVEEELAM
ILPDAKIDRMDLDTTRAKNAFQRIIYDFENRKTDILTGTQMVTKGLDFENVQVVGILSAD
NMLSFPDFRAHERSFQMMEQVSGRAGRKDKQGIVIIQTWQPKHPVIQDVVQHDYQSMYNR
QLAERWRFRYPPYYRLVMVKLKHKKPELLNEAAAVLARDMKARFGNLVYGPEYPMVSRVK
NWYIKQIMLKIKRNEQLSDRKKELQEAISEFKKQTPYKSVRVQIDVDPQ
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggagagagtgaccctttttgtggatgtgttactgccgcttccgttgcccggtacgttt
acttaccgggtgccttttgcattgaacgatgctgtgcaggcaggacaacgggtttcggta
cagtttggtccgcgaaaagtgtatgcggggctgattgtaaaaattcatcagcagccaccg
caaaaaggaattcccaaatatatcctttcggttttggacagccggccggtggtaaacgat
ttccagcttcgcttttggcagtggatagccggttattacatgagtacgctgggcgaagtg
atggcagcggctttgccgtcggcttttaaactgagcagcgagtcgaaagtggttttatcc
cccgattttgttcccgatacggaaaccctcagcgaaccggaataccggctgacagaggcg
ctgttgcaaaagaaaaagctgaccgttcacgaagtttcccggattgtgggataccagaaa
gtgctgcctttgctgaaaaccatgattgaaaggcggcttattatgatggaagaagagctg
gtacagcagtataagcctaagaaaaccaaaatgataaagctttcggaagcttttcttgac
gagcgtgcattgcagcaactgatggatcaattgtctaaacgggcacacaagcaactggaa
ttgttgatgggatttcttaccctgtcgggattccctttgaaaaaagatttttcggtttcc
aaaagcgatttgttacataaaacacaggcatccgaaaatgcgttaaaagcacttacggat
aagggggtttttgtgcaggaagaggtggtgatcagccgttttaccggtgaaaacaacgaa
acggaaaagactttttcgttgagtgccgagcagcaaaaagcgtttcactctttgaaagaa
cagatgcaggaacaccgggtggttttgttgcacggcgtcacttcgagcggaaaaaccgaa
ctctacatcaaattgatggaagaagcgttggccgaaggaaaacaggtgctttatttattg
cctgaaattgcattaacaacacagattatcaatcggttgcggaaacattttggcgatgaa
gtaggcgtgtatcattcgcggtacaaccaaaacgagcgggccgaagtatgggaaaatgtg
gccggtatccagtcggccgaagtgcataaaccttaccggatcattctcgggccgcgctcg
gcgatgtttctgccgttcgaccggctgggactggtcattgtggatgaagaacatgattcg
tcgtacaagcagttcgacccggcaccgcgctacaatgcccgcgacgccgtgatttatctt
gccggtttgcatgatgcccgcgtggttctgggctcggctaccccggctgtcgaaacgtat
tttaatgcacaaaacggaaaatacggactggtggaactgagtgaacgattcggcggggtg
aaaatgcccgagatcattgtggtaaacatgaaagaagaaaaacgccgccggatgctgaag
tcacatttttcatccgttttgttgcatcatattcaggcggcgctggacgataaaaaacag
gtgattttgtttcaaaaccggcgcggtttttccacccgcattgagtgcgagcagtgtaac
tgggttcccgaatgcaagtactgcgatgtgaccatgacctatcacaaaaaaagccagttg
ttaaaatgccattactgtggttactcgcggccggtgccggctgtttgcgagcattgcggc
agcccgaatctggtgatgcaggggtttggtaccgaaaaagtggaagaagaactggccatg
atattgcctgatgccaagatcgaccggatggatttggataccacccgggcgaaaaatgct
tttcagcgtatcatttatgattttgaaaaccgtaaaaccgatatccttaccggaacccag
atggtaaccaaaggacttgattttgaaaatgtgcaggtggtaggtattctgagtgcggac
aatatgctgagtttccctgatttcagggcacacgaacgcagttttcagatgatggaacag
gtgagtgggcgtgccggacgcaaagataaacaggggatcgtgattattcagacctggcaa
ccgaaacatccggtcattcaggatgtggtgcagcatgattaccaaagcatgtacaaccgg
cagctggccgagcggtggcgtttccggtatccgccttattaccggctggtgatggtcaaa
ctgaaacacaaaaagcctgagttgctcaacgaagcggcagcggtgctggcccgcgatatg
aaagcccgtttcggaaatcttgtttacggaccggaatatccgatggtctctcgtgtgaaa
aactggtatatcaagcagattatgctgaagatcaaacggaatgaacaactgtctgaccgg
aaaaaagaattacaggaagccatcagcgagttcaaaaaacaaacgccctataaatcggtg
cgcgttcaaattgatgtggatccgcaataa
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