Candidatus Sulfidibacterium hydrothermale: LA303_04515
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Entry
LA303_04515 CDS
T07944
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
shyr
Candidatus Sulfidibacterium hydrothermale
Brite
KEGG Orthology (KO) [BR:
shyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shyr03016
]
LA303_04515
Enzymes [BR:
shyr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
LA303_04515
Transfer RNA biogenesis [BR:
shyr03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
LA303_04515
Prokaryotic type
LA303_04515
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
DUF4130
Motif
Other DBs
NCBI-ProteinID:
UBM63238
LinkDB
All DBs
Position
1155200..1156114
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AA seq
304 aa
AA seq
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MSDFEITILGNGSAVPTSWQNPTAQMVRYGRQRFLVDCGEGTQMQMIRYNISYRNLSHVF
ISHLHGDHYFGLVGLISTLHLYGRQVPLHVYGPEPLEEIIRMQLDISGTHLHFPLVFHVL
SHAALLYEDRLLEVHSFPLKHSLPTWGFLFKEKQKERNLNKDFVSRFHPGVEQMHRIKQG
ADYELPDGKVLPNREITHDPFPSRSYAYCSDTAYDEDIIPFIQGADLLYHEATFDDSMAG
QAAEKRHSTARQAATIAAKAKVKKLLLGHFSARFRDPEHLLHEARQVFPDTFLSRQGEKY
IPGV
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattttgaaataaccatcctgggaaacggctcggcggtgcctacgtcgtggcag
aatccgacagcacaaatggtgcgctacgggcgtcagcggtttttggtcgattgcggggaa
ggaacacaaatgcaaatgatccggtacaacatttcgtaccggaatctttctcatgttttt
atcagccatttacatggcgatcattacttcggtttggtagggttgatttctacactgcat
ttatacggacgtcaggttcctttgcatgtttatggtccggagccgttggaggaaattatc
cggatgcagcttgatatttccggaacacacctgcattttccgttggtttttcatgttttg
tcgcatgccgctttgctttatgaagaccggttgcttgaagtacacagttttccgttgaaa
cattctttgccgacatggggttttctgtttaaggaaaagcagaaagagcggaacctgaat
aaagattttgtttcccgttttcatccgggagtggagcaaatgcaccggataaaacaggga
gccgattatgagttgcctgacgggaaagtgttacccaatcgggaaataacccatgatccg
tttccttcgcgaagctatgcgtattgttcggatacggcttatgacgaagacattattccg
tttattcagggcgccgatttattatatcatgaagctacttttgatgattcgatggcggga
caggccgctgaaaaacgccattcaacagcccggcaagcggctactattgctgccaaagcc
aaagtaaagaaattattgctgggtcatttctcggcccggtttcgcgatccggagcatttg
cttcacgaagcccggcaggtgtttcctgatacatttttatcccggcagggcgaaaaatat
attcccggagtctga
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